About Lamellibrachia columna

Lamellibrachia columna is a species of tube worm in the family Siboglinidae, found in deep-sea hydrothermal vents and cold seep ecosystems. This species thrives in extreme environments by relying on a symbiotic relationship with sulfide-oxidizing bacteria housed in its trophosome, a specialized organ. These bacteria convert hydrogen sulfide into organic compounds, providing the worm with essential nutrients. Lamellibrachia columna plays a vital role in deep-sea ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.

Classification

Animalia (Kingdom); Annelida (Phylum); Polychaeta (Class); Sedentaria (Subclass); Canalipalpata (Infraclass); Sabellida (Order); Siboglinidae (Family); Lamellibrachia (Genus); Lamellibrachia columna (Species)

Original Name

Lamellibrachia columna Southward, 1991

Original Description/Redescription

1. Southward E C. Three new species of Pogonophora, including two vestimentiferans, from hydrothermal sites in the Lau Back-arc Basin (Southwest Pacific Ocean)[J]. Journal of Natural History, 1991, 25(4): 859-881. (Southward et al., 1991)
2. Southward E C. Three new species of Pogonophora, including two vestimentiferans, from hydrothermal sites in the Lau Back-arc Basin (Southwest Pacific Ocean)[J]. Journal of Natural History, 1991, 25(4): 859-881. (Kobayashi et al., 2015)

Partial Description

Tube length 277.0–661.5 mm (mean=545.7 mm, n=4); outer width of top funnel opening 9.5–11.2 mm (n=4); width of basal end 2.8–7.8 mm (mean=4.5 mm, n=4). All tubes incomplete, lacking considerable parts of basal regions. External characters of tube variable along its length.Anterior part straight or slightly curved, but not coiled, with many short collars. Inter-collar distance generally small but varying among specimens. Posterior part sinuous, curled, smooth, without collars.

Etymology

The specific epithet sagami,asnoun in apposition, refers to the province name of the Edo period for Kanagawa, the coastal area of Sagami Bay, the type locality

Distribution/Locality

The species is known from cold seep areas off Hatsushima and on the Okinoyama Bank, Sagami Bay, the Kanesu-no-se Bank, the Ryuyo Canyon, the Omaezaki Spur and the Tenryu Knoll, the Nankai Trough, and the Kuroshima Knoll, the Ryukyu Trench between 270–1300 m. It is also known from hydrothermal vent fields on the Iheya Ridge and the North Iheya Knoll, the Okinawa Trough, and the Sumisu Caldera, the Izu-Bonin arc between 900–1500 m depth


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia columnaAnnelida-Cold seep810-1,870cold seeps off the east coast of the North Island of New Zealand53616

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
wsLamColu1.1879.7MbChromosome2023CAVLEN01WELLCOME SANGER INSTITUTEPRJEB6835397.30 472.9/472.540.5-32,318

Gene Information

<< First 396 397 398 399 400 401 402 403 404 405 Forward> Last>>        661 pages in total

Gene IDDescription
ENSZWYP00000020052.1EUKARYOTIC TRANSLATION INITIATION FACTOR 3 -RELATED
ENSZWYP00000020053.1DUAL SPECIFICITY PROTEIN PHOSPHATASE
ENSZWYP00000020054.1
ENSZWYP00000020055.1
ENSZWYP00000020056.13-HYDROXY-3-METHYLGLUTARYL COENZYME A SYNTHASE
ENSZWYP00000020057.1
ENSZWYP00000020058.1PROPERDIN
ENSZWYP00000020059.1SYNAPTONEMAL COMPLEX PROTEIN-RELATED
ENSZWYP00000020060.1LIPOPOLYSACCHARIDE CHOLINEPHOSPHOTRANSFERASE LICD
ENSZWYP00000020061.1TRANSIENT RECEPTOR POTENTIAL CATION CHANNEL, SUBFAMILY M, MEMBER 6
ENSZWYP00000020062.1
ENSZWYP00000020063.1PROPERDIN
ENSZWYP00000020064.1
ENSZWYP00000020065.1IRE1-RELATED
ENSZWYP00000020066.1(E3-INDEPENDENT) E2 UBIQUITIN-CONJUGATING ENZYME
ENSZWYP00000020067.1ZINC FINGER AND SCAN DOMAIN-CONTAINING
ENSZWYP00000020068.1LEUCOKININ RECEPTOR-RELATED
ENSZWYP00000020069.1
ENSZWYP00000020070.1
ENSZWYP00000020071.1LIPIN
ENSZWYP00000020072.1
ENSZWYP00000020073.1
ENSZWYP00000020074.1FATTY ACID ACYL TRANSFERASE-RELATED
ENSZWYP00000020075.1
ENSZWYP00000020076.1
ENSZWYP00000020077.1
ENSZWYP00000020078.1ZINC FINGER CCHC DOMAIN-CONTAINING PROTEIN 7
ENSZWYP00000020079.1
ENSZWYP00000020080.1HISTONE ACETYLTRANSFERASE COMPLEX
ENSZWYP00000020081.1
ENSZWYP00000020082.1
ENSZWYP00000020083.1
ENSZWYP00000020084.1
ENSZWYP00000020085.1GABA-B RECEPTOR
ENSZWYP00000020086.1
ENSZWYP00000020087.1
ENSZWYP00000020088.1
ENSZWYP00000020089.1PROMININ PROM PROTEIN
ENSZWYP00000020090.1
ENSZWYP00000020091.1LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED
ENSZWYP00000020092.1HISTONE ACETYLTRANSFERASE COMPLEX
ENSZWYP00000020093.1C20ORF30 PROTEIN
ENSZWYP00000020094.1G-PROTEIN COUPLED RECEPTOR
ENSZWYP00000020095.1HUNTINGTIN-INTERACTING PROTEIN K FAMILY MEMBER
ENSZWYP00000020096.1CENTROMERE PROTEIN I
ENSZWYP00000020097.1GABA-B RECEPTOR
ENSZWYP00000020098.1L 2 01289
ENSZWYP00000020099.1
ENSZWYP00000020100.1
ENSZWYP00000020101.1
TOP