About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_002278-T1G-PROTEIN COUPLED RECEPTOR
LLU|FUN_002279-T1G-PROTEIN COUPLED RECEPTOR
LLU|FUN_002280-T1G-PROTEIN COUPLED RECEPTOR
LLU|FUN_002281-T1FMRFAMIDE RECEPTOR-RELATED
LLU|FUN_002282-T1
LLU|FUN_002283-T1
LLU|FUN_002284-T1
LLU|FUN_002285-T1
LLU|FUN_002286-T1SLIT HOMOLOG
LLU|FUN_002287-T1HILLARIN
LLU|FUN_002288-T1
LLU|FUN_002289-T1THIOREDOXIN PEROXIDASE
LLU|FUN_002290-T1
LLU|FUN_002291-T1SARM1
LLU|FUN_002292-T1BACTERICIDAL PERMEABILITY-INCREASING BPI PROTEIN-RELATED
LLU|FUN_002293-T1
LLU|FUN_002294-T1
LLU|FUN_002295-T1TETRATRICOPEPTIDE REPEAT PROTEIN 31
LLU|FUN_002296-T1RIBOSOMAL PROTEIN L7AE FAMILY MEMBER
LLU|FUN_002297-T1POLY(U)-BINDING-SPLICING FACTOR PUF60-B-RELATED
LLU|FUN_002298-T1TELOMERASE PROTEIN COMPONENT 1 TEP1
LLU|FUN_002299-T1TELOMERASE PROTEIN COMPONENT 1 TEP1
LLU|FUN_002300-T1
LLU|FUN_002301-T1TELOMERASE PROTEIN COMPONENT 1 TEP1
LLU|FUN_002302-T1
LLU|FUN_002303-T1
LLU|FUN_002304-T1
LLU|FUN_002305-T1FIBRINOGEN/TENASCIN/ANGIOPOEITIN
LLU|FUN_002306-T1
LLU|FUN_002307-T1IGGFC_BINDING DOMAIN-CONTAINING PROTEIN
LLU|FUN_002308-T1
LLU|FUN_002309-T1
LLU|FUN_002310-T1
LLU|FUN_002311-T1
LLU|FUN_002312-T1
LLU|FUN_002313-T1
LLU|FUN_002314-T1
LLU|FUN_002315-T1
LLU|FUN_002316-T1
LLU|FUN_002317-T1
LLU|FUN_002318-T1
LLU|FUN_002319-T1ALPHA-MANNOSIDASE
LLU|FUN_002320-T1BASIC HELIX-LOOP-HELIX PROTEIN NEUROGENIN-RELATED
LLU|FUN_002321-T140S RIBOSOMAL PROTEIN SA
LLU|FUN_002322-T1N-TERMINAL ASPARAGINE AMIDOHYDROLASE
LLU|FUN_002323-T1
LLU|FUN_002324-T1PROTEASE FAMILY M14 CARBOXYPEPTIDASE A,B
LLU|FUN_002325-T1UNCHARACTERIZED
LLU|FUN_002326-T1TETHER CONTAINING UBX DOMAIN FOR GLUT4
LLU|FUN_002327-T1H4 D10S170 PROTEIN-RELATED
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