About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_002328-T1WD REPEAT-CONTAINING PROTEIN 53
LLU|FUN_002329-T1FATTY ACID SYNTHASE
LLU|FUN_002330-T1
LLU|FUN_002331-T1
LLU|FUN_002332-T1DYNACTIN 1-RELATED MICROTUBULE-BINDING
LLU|FUN_002333-T1
LLU|FUN_002334-T1
LLU|FUN_002335-T1AGAP008228-PA
LLU|FUN_002336-T1DDB1- AND CUL4-ASSOCIATED FACTOR 10
LLU|FUN_002337-T1
LLU|FUN_002338-T1DIHYDRODIPICOLINATE SYNTHASE
LLU|FUN_002339-T1RIBOSE-5-PHOSPHATE ISOMERASE
LLU|FUN_002340-T1-
LLU|FUN_002341-T1
LLU|FUN_002342-T1
LLU|FUN_002344-T1
LLU|FUN_002345-T1
LLU|FUN_002346-T1SURFEIT LOCUS PROTEIN 2
LLU|FUN_002347-T1E3 UBIQUITIN-PROTEIN LIGASE NHLRC1-RELATED
LLU|FUN_002348-T1DELTEX-RELATED
LLU|FUN_002349-T1AMINOTRANSFERASE
LLU|FUN_002350-T1
LLU|FUN_002351-T1
LLU|FUN_002352-T1KH DOMAIN CONTAINING RNA BINDING PROTEIN
LLU|FUN_002353-T1PROTEIN CBG24663
LLU|FUN_002354-T1ATP-DEPENDENT RNA HELICASE DBP3
LLU|FUN_002355-T1MICROSOMAL PROSTAGLANDIN E SYNTHASE-2
LLU|FUN_002356-T1NUCLEAR HORMONE RECEPTOR
LLU|FUN_002357-T1LONG-CHAIN-FATTY-ACID--COA LIGASE
LLU|FUN_002358-T1LONG-CHAIN-FATTY-ACID--COA LIGASE
LLU|FUN_002359-T1LONG-CHAIN-FATTY-ACID--COA LIGASE
LLU|FUN_002360-T1
LLU|FUN_002361-T1THYMIDINE PHOSPHORYLASE
LLU|FUN_002362-T1
LLU|FUN_002363-T1THYMIDINE PHOSPHORYLASE
LLU|FUN_002364-T1ALDEHYDE DEHYDROGENASE-RELATED
LLU|FUN_002365-T1UFM1-SPECIFIC PROTEASE 2
LLU|FUN_002366-T1SERINE PROTEASE INHIBITOR, SERPIN
LLU|FUN_002367-T1
LLU|FUN_002368-T1
LLU|FUN_002369-T1
LLU|FUN_002370-T1
LLU|FUN_002371-T1
LLU|FUN_002372-T1NEUROPEPTIDE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
LLU|FUN_002373-T1
LLU|FUN_002374-T1
LLU|FUN_002375-T1SKI ONCOGENE-RELATED
LLU|FUN_002376-T1IP19862P
LLU|FUN_002377-T14.1 G PROTEIN
LLU|FUN_002378-T1GLUCONOKINASE-RELATED
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