Synaphobranchus kaupii, also known as Kaup's arrowtooth eel, is an eel in the family Synaphobranchidae. It is a marine, deep water-dwelling eel which is known from the Indo-Western Pacific and eastern and western Atlantic Ocean. It dwells at a depth range of 120 to 4,800 metres, and inhabits the upper abyssal zone on the continental slope.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Synaphobranchus kaupii | Chordata | Kaup's arrowtooth eel | Deep sea | 967 | Southwest of Taiwan (22°17.466N 119°59.652 E) | 118154 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| SKAU_1.1 | 1.5Gb | Chromosome | 2023 | JAINUF01 | GenoFish - INRAE (Fish Physiology and Genomics laboratory) | PRJNA743503 | 97.90% | 43,073 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Genome structures resolve the early diversification of teleost fishes | Science | 36758078 |
| Gene ID | Description |
|---|---|
| SKAU_T00023510 | ATP SYNTHASE GAMMA CHAIN |
| SKAU_T00023520 | KIN17 KIN, ANTIGENIC DETERMINANT OF RECA PROTEIN HOMOLOG |
| SKAU_T00023530 | INTER-ALPHA-TRYPSIN INHIBITOR HEAVY CHAIN FAMILY MEMBER |
| SKAU_T00023540 | INTER-ALPHA-TRYPSIN INHIBITOR HEAVY CHAIN FAMILY MEMBER |
| SKAU_T00023550 | VACUOLAR MEMBRANE PROTEIN YPL162C |
| SKAU_T00023560 | POLYCOMB GROUP PROTEIN |
| SKAU_T00023570 | |
| SKAU_T00023580 | UBIQUITIN-LIKE PROTEIN 5 |
| SKAU_T00023590 | FCH AND DOUBLE SH3 DOMAINS PROTEIN |
| SKAU_T00023600 | POLYCOMB GROUP PROTEIN |
| SKAU_T00023610 | |
| SKAU_T00023620 | |
| SKAU_T00023630 | SERINE/THREONINE-PROTEIN KINASE |
| SKAU_T00023640 | |
| SKAU_T00023650 | 6-PHOSPHOFRUCTO-2-KINASE/FRUCTOSE-2,6-BISPHOSPHATASE |
| SKAU_T00023660 | RAB GDP-DISSOCIATION INHIBITOR |
| SKAU_T00023670 | SOWAH (DROSOPHILA) HOMOLOG |
| SKAU_T00023680 | RHO GUANINE NUCLEOTIDE EXCHANGE FACTOR AT 64C, ISOFORM A |
| SKAU_T00023690 | |
| SKAU_T00023700 | MUSKELIN |
| SKAU_T00023710 | PODOCALYXIN |
| SKAU_T00023720 | PLEXIN |
| SKAU_T00023730 | PLEXIN |
| SKAU_T00023740 | |
| SKAU_T00023750 | PLEXIN |
| SKAU_T00023760 | |
| SKAU_T00023770 | |
| SKAU_T00023780 | |
| SKAU_T00023790 | |
| SKAU_T00023800 | |
| SKAU_T00023810 | |
| SKAU_T00023820 | |
| SKAU_T00023830 | PLEXIN |
| SKAU_T00023840 | COILED-COIL-HELIX-COILED-COIL-HELIX DOMAIN CONTAINING 6 |
| SKAU_T00023850 | EXOCYST COMPLEX COMPONENT 4 |
| SKAU_T00023860 | |
| SKAU_T00023870 | |
| SKAU_T00023880 | |
| SKAU_T00023890 | |
| SKAU_T00023900 | COLLAGEN ALPHA |
| SKAU_T00023910 | COLLAGEN ALPHA |
| SKAU_T00023920 | |
| SKAU_T00023930 | UROCORTIN-2 AND 3 |
| SKAU_T00023940 | COATOMER SUBUNIT GAMMA |
| SKAU_T00023950 | MONOACYLGLYCEROL LIPASE |
| SKAU_T00023960 | CATION TRANSPORTING ATPASE |
| SKAU_T00023970 | |
| SKAU_T00023980 | |
| SKAU_T00023990 | EPIPHYCAN-RELATED |
| SKAU_T00024000 | AGAP008170-PA |
