The thorny skate Amblyraja radiata is a species of fish in the family Rajidae. This bottom-living skate lives in the North and south-eastern Atlantic Ocean in depths ranging from 20 to 1,000 m and water temperatures from −1 to 14 °C. It has a hard, roughly triangular snout and a tail, which is shorter than its body. It eats crustaceans, small fishes, and worms. It produces egg capsules, which hatch outside the body.
Animalia (Kingdom); Chordata (Phylum); Vertebrata (Subphylum); Gnathostomata (Infraphylum); Chondrichthyes (Parvphylum); Elasmobranchii (Class); Neoselachii (Subclass); Batoidea (Infraclass); Rajiformes (Order); Rajidae (Family); Amblyraja (Genus); Amblyraja radiata (Species)
Raja radiata Donovan, 1808
Diet Crustaceans, bony fishes and polychaete worms
Greenland and Hudson Bay to South Carolina
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Amblyraja radiata | Chordata | thorny skate | Hydrothermal vent | ～1500 | Tocopilla, northern Chile | 386614 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness (%) | Scaffold/Contig N50 (kb) | GC content (%) | Repeat Rate (%) | Gene Number |
|---|---|---|---|---|---|---|---|---|---|---|---|
| sAmbRad1.1.pri | 2.6Gb | Chromosome | 2020 | JAAGWR01 | Vertebrate Genomes Project | PRJNA591369 | 96.70 | 62,100/1,500 | 44.5 | - | 18,474 |
| Gene ID | Description |
|---|---|
| XP_032894471.1 | OXIDOREDUCTASE, 2OG-FE II OXYGENASE FAMILY PROTEIN |
| XP_032894472.1 | ZINC FINGER PROTEIN 200 |
| XP_032894473.1 | SAD1/UNC-84-LIKE PROTEIN-RELATED |
| XP_032894474.1 | FIBROBLAST GROWTH FACTOR |
| XP_032894475.1 | PARATHYROID HORMONE |
| XP_032894476.1 | PARATHYROID HORMONE-RELATED |
| XP_032894477.1 | V D J RECOMBINATION-ACTIVATING PROTEIN 2 |
| XP_032894478.1 | GALANIN |
| XP_032894479.1 | INSULIN/INSULIN GROWTH FACTOR |
| XP_032894480.1 | |
| XP_032894481.1 | INTERFERON INDUCIBLE TRANSMEMBRANE PROTEIN |
| XP_032894482.1 | INTERFERON INDUCIBLE TRANSMEMBRANE PROTEIN |
| XP_032894483.1 | INTERFERON INDUCIBLE TRANSMEMBRANE PROTEIN |
| XP_032894484.1 | INTERFERON INDUCIBLE TRANSMEMBRANE PROTEIN |
| XP_032894485.1 | SYNEMBRYN |
| XP_032894486.1 | SYNEMBRYN |
| XP_032894487.1 | OXIDOREDUCTASE-RELATED |
| XP_032894488.1 | OXIDOREDUCTASE-RELATED |
| XP_032894489.1 | 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 13 |
| XP_032894490.1 | NAD-DEPENDENT PROTEIN DEACYLASE SIRTUIN-5, MITOCHONDRIAL-RELATED |
| XP_032894491.1 | NAD-DEPENDENT PROTEIN DEACYLASE SIRTUIN-5, MITOCHONDRIAL-RELATED |
| XP_032894492.1 | SHIPPO-1-RELATED |
| XP_032894493.1 | SHIPPO-1-RELATED |
| XP_032894494.1 | GOLGI SNARE BET1-RELATED |
| XP_032894495.1 | DEFORMED EPIDERMAL AUTOREGULATORY FACTOR 1 HOMOLOG SUPPRESSIN |
| XP_032894496.1 | ADRENERGIC RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR |
| XP_032894497.1 | INTERFERON INDUCIBLE TRANSMEMBRANE PROTEIN |
| XP_032894498.1 | PHD AND RING FINGER DOMAIN-CONTAINING PROTEIN 1 |
| XP_032894499.1 | PHD AND RING FINGER DOMAIN-CONTAINING PROTEIN 1 |
| XP_032894500.1 | PHD AND RING FINGER DOMAIN-CONTAINING PROTEIN 1 |
| XP_032894501.1 | PHD AND RING FINGER DOMAIN-CONTAINING PROTEIN 1 |
| XP_032894502.1 | PHD AND RING FINGER DOMAIN-CONTAINING PROTEIN 1 |
| XP_032894503.1 | UPF0705 PROTEIN C11ORF49 |
| XP_032894504.1 | ACETYLGLUCOSAMINYLTRANSFERASE |
| XP_032894505.1 | ACETYLGLUCOSAMINYLTRANSFERASE |
| XP_032894506.1 | ACETYLGLUCOSAMINYLTRANSFERASE |
| XP_032894507.1 | ACETYLGLUCOSAMINYLTRANSFERASE |
| XP_032894508.1 | GAMMA-BUTYROBETAINE HYDROXYLASE-RELATED |
| XP_032894509.1 | GAMMA-BUTYROBETAINE HYDROXYLASE-RELATED |
| XP_032894510.1 | HOMEOBOX PROTEIN ARISTALESS |
| XP_032894511.1 | FIN BUD INITIATION FACTOR FIBIN |
| XP_032894512.1 | NY-REN-41 ANTIGEN L15 -RELATED |
| XP_032894513.1 | GLYCOPROTEIN HORMONE RECEPTOR |
| XP_032894514.1 | S-ADENOSYL-METHYLTRANSFERASE MRAW |
| XP_032894515.1 | CENTROMERE PROTEIN E |
| XP_032894516.1 | CENTROMERE PROTEIN E |
| XP_032894517.1 | CENTROMERE PROTEIN E |
| XP_032894518.1 | CENTROMERE PROTEIN E |
| XP_032894519.1 | LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED PROTEIN 2-RELATED |
| XP_032894520.1 | LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED PROTEIN 2-RELATED |
