The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama03812 | |
Ama03814 | |
Ama03815 | |
Ama03816 | TRANSCRIPTIONAL REGULATOR |
Ama03818 | TETRATRICOPEPTIDE REPEAT PROTEIN 6 |
Ama03819 | |
Ama03820 | |
Ama03821 | |
Ama03824 | |
Ama03828 | METAXIN RELATED |
Ama03829 | UDP-N-ACETYLGLUCOSAMINE--PEPTIDE N-ACETYLGLUCOSAMINYLTRANSFERASE 110 KDA SUBUNIT |
Ama03830 | UDP-N-ACETYLGLUCOSAMINE--PEPTIDE N-ACETYLGLUCOSAMINYLTRANSFERASE 110 KDA SUBUNIT |
Ama03831 | UDP-N-ACETYLGLUCOSAMINE--PEPTIDE N-ACETYLGLUCOSAMINYLTRANSFERASE 110 KDA SUBUNIT |
Ama03832 | |
Ama03835 | LD33804P |
Ama03837 | |
Ama03838 | |
Ama03839 | UNCHARACTERIZED |
Ama03841 | |
Ama03845 | ULP_PROTEASE DOMAIN-CONTAINING PROTEIN |
Ama03846 | |
Ama03847 | RNA BINDING PROTEIN |
Ama03848 | |
Ama03849 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama03851 | THAP DOMAIN PROTEIN |
Ama03852 | EXONUCLEASE, PHAGE-TYPE/RECB, C-TERMINAL DOMAIN-CONTAINING PROTEIN |
Ama03857 | UNCHARACTERIZED |
Ama03864 | RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR |
Ama03870 | |
Ama03871 | EXONUCLEASE, PHAGE-TYPE/RECB, C-TERMINAL DOMAIN-CONTAINING PROTEIN |
Ama03872 | THAP DOMAIN PROTEIN |
Ama03874 | |
Ama03876 | |
Ama03881 | O-ACYLTRANSFERASE |
Ama03883 | |
Ama03884 | |
Ama03885 | |
Ama03886 | |
Ama03887 | 52 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED |
Ama03888 | 52 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED |
Ama03889 | MITOCHONDRIA-EATING PROTEIN-RELATED |
Ama03890 | |
Ama03891 | |
Ama03892 | |
Ama03894 | |
Ama03895 | EXONUCLEASE, PHAGE-TYPE/RECB, C-TERMINAL DOMAIN-CONTAINING PROTEIN |
Ama03896 | |
Ama03897 | EXONUCLEASE, PHAGE-TYPE/RECB, C-TERMINAL DOMAIN-CONTAINING PROTEIN |
Ama03906 | |
Ama03908 | THYMOSIN BETA |