The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama38244 | ZINC FINGER AND BTB DOMAIN-CONTAINING |
Ama38245 | ACONITASE/IRON-RESPONSIVE ELEMENT FAMILY MEMBER |
Ama38246 | |
Ama38247 | |
Ama38251 | THREE PRIME REPAIR EXONUCLEASE 1, 2 |
Ama38252 | PUTATIVE-RELATED |
Ama38253 | |
Ama38254 | SOLUTE CARRIER FAMILY 2 |
Ama38255 | |
Ama38257 | MYOSIN LIGHT CHAIN 1, 3 |
Ama38258 | PRE-MRNA SPLICING FACTOR |
Ama38259 | RAN BINDING PROTEIN 9-RELATED |
Ama38260 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama38261 | |
Ama38262 | ATP-DEPENDENT DNA HELICASE |
Ama38263 | THAP DOMAIN PROTEIN |
Ama38264 | TRANSPOSON |
Ama38266 | REVERSE TRANSCRIPTASES |
Ama38269 | VOLTAGE AND LIGAND GATED POTASSIUM CHANNEL |
Ama38270 | |
Ama38271 | VOLTAGE AND LIGAND GATED POTASSIUM CHANNEL |
Ama38272 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Ama38273 | RFX TRANSCRIPTION FACTOR FAMILY |
Ama38274 | REVERSE TRANSCRIPTASES |
Ama38275 | ALKALINE PHOSPHATASE |
Ama38276 | |
Ama38277 | INNER MEMBRANE PROTEIN YEDE |
Ama38278 | |
Ama38279 | SODIUM-COUPLED MONOCARBOXYLATE TRANSPORTER |
Ama38280 | IP13529P |
Ama38281 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Ama38282 | SODIUM-COUPLED MONOCARBOXYLATE TRANSPORTER |
Ama38283 | PERIOSTIN-RELATED |
Ama38285 | PROTEIN FOLDING REGULATOR |
Ama38286 | CORTICOTROPIN-RELEASING FACTOR-BINDING PROTEIN |
Ama38287 | SODIUM-COUPLED MONOCARBOXYLATE TRANSPORTER |
Ama38288 | SODIUM-COUPLED MONOCARBOXYLATE TRANSPORTER |
Ama38289 | SODIUM-COUPLED MONOCARBOXYLATE TRANSPORTER |
Ama38290 | CHITIN SYNTHASE |
Ama38291 | CHITIN SYNTHASE |
Ama38292 | CHITIN SYNTHASE |
Ama38293 | ACROSIN-RELATED |
Ama38294 | HEPARAN SULFATE SULFOTRANSFERASE |
Ama38296 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama38299 | PROTEASE M1 ZINC METALLOPROTEASE |
Ama38300 | UNCHARACTERIZED |
Ama38303 | CORONIN |
Ama38304 | PROTEASE M1 ZINC METALLOPROTEASE |
Ama38305 | - |
Ama38311 |