The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama38312 | |
Ama38313 | |
Ama38314 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama38315 | LD44762P |
Ama38316 | |
Ama38317 | CHARGED MULTIVESICULAR BODY PROTEIN |
Ama38318 | CYSTEINE PROTEASE FAMILY C1-RELATED |
Ama38319 | COMM DOMAIN CONTAINING PROTEIN 2 |
Ama38320 | |
Ama38322 | DEPHOSPHO-COA KINASE-RELATED |
Ama38323 | CYSTEINE PROTEASE FAMILY C1-RELATED |
Ama38324 | A-KINASE-INTERACTING PROTEIN 1 |
Ama38325 | ZINC FINGER PROTEIN 593 |
Ama38326 | KINESIN-RELATED |
Ama38330 | TRYPSIN-RELATED |
Ama38332 | |
Ama38333 | |
Ama38334 | IP13529P |
Ama38335 | |
Ama38336 | AGAP001705-PA |
Ama38337 | PROTEASE M1 ZINC METALLOPROTEASE |
Ama38338 | CYSTEINE PROTEASE FAMILY C1-RELATED |
Ama38339 | 40S RIBOSOMAL PROTEIN S24 |
Ama38340 | |
Ama38341 | |
Ama38347 | CALSYNTENIN |
Ama38350 | MATING RESPONSE PROTEIN POI2 |
Ama38351 | |
Ama38352 | WD40 REPEAT DOMAIN 95 |
Ama38356 | |
Ama38360 | |
Ama38361 | SET DOMAIN-CONTAINING PROTEIN-RELATED |
Ama38362 | SET DOMAIN-CONTAINING PROTEIN-RELATED |
Ama38364 | FTP DOMAIN-CONTAINING PROTEIN |
Ama38365 | U1 SMALL NUCLEAR RIBONUCLEOPROTEIN A/U2 SMALL NUCLEAR RIBONUCLEOPROTEIN B |
Ama38366 | |
Ama38367 | PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE |
Ama38368 | PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE |
Ama38369 | |
Ama38370 | |
Ama38371 | |
Ama38372 | PUTATIVE-RELATED |
Ama38373 | |
Ama38374 | HEPARAN SULFATE SULFOTRANSFERASE |
Ama38375 | |
Ama38376 | 52 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED |
Ama38377 | RNA BINDING PROTEIN |
Ama38378 | |
Ama38381 | NEUROTRANSMITTER GATED ION CHANNEL |
Ama38382 |