Lamellibrachia columna is a species of tube worm in the family Siboglinidae, found in deep-sea hydrothermal vents and cold seep ecosystems. This species thrives in extreme environments by relying on a symbiotic relationship with sulfide-oxidizing bacteria housed in its trophosome, a specialized organ. These bacteria convert hydrogen sulfide into organic compounds, providing the worm with essential nutrients. Lamellibrachia columna plays a vital role in deep-sea ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Lamellibrachia columna | Annelida | - | Cold seep | 810-1,870 | cold seeps off the east coast of the North Island of New Zealand | 53616 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| wsLamColu1.1 | 879.7Mb | Chromosome | 2023 | CAVLEN01 | WELLCOME SANGER INSTITUTE | PRJEB68353 | - | 32,318 |
| Gene ID | Description |
|---|---|
| ENSZWYP00000028002.1 | |
| ENSZWYP00000028003.1 | |
| ENSZWYP00000028004.1 | ACTIVATING TRANSCRIPTION FACTOR ATF 4/5 |
| ENSZWYP00000028005.1 | SEC31-RELATED PROTEIN |
| ENSZWYP00000028006.1 | NUCLEAR DISTRIBUTION PROTEIN NUDE HOMOLOG 1 |
| ENSZWYP00000028007.1 | |
| ENSZWYP00000028008.1 | CALCIUM-TRANSPORTING ATPASE |
| ENSZWYP00000028009.1 | CAS SCAFFOLDING PROTEIN |
| ENSZWYP00000028010.1 | |
| ENSZWYP00000028011.1 | |
| ENSZWYP00000028012.1 | NUCLEAR DISTRIBUTION PROTEIN NUDE HOMOLOG 1 |
| ENSZWYP00000028013.1 | CAS SCAFFOLDING PROTEIN |
| ENSZWYP00000028014.1 | |
| ENSZWYP00000028015.1 | |
| ENSZWYP00000028016.1 | PHOSPHOMANNOMUTASE |
| ENSZWYP00000028017.1 | DNA MISMATCH REPAIR PROTEIN MLH, PMS, MUTL |
| ENSZWYP00000028018.1 | |
| ENSZWYP00000028019.1 | |
| ENSZWYP00000028020.1 | AMINOTRANSFERASE CLASS V |
| ENSZWYP00000028021.1 | SEC31-RELATED PROTEIN |
| ENSZWYP00000028022.1 | |
| ENSZWYP00000028023.1 | NUCLEAR DISTRIBUTION PROTEIN NUDE HOMOLOG 1 |
| ENSZWYP00000028024.1 | |
| ENSZWYP00000028025.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| ENSZWYP00000028026.1 | |
| ENSZWYP00000028027.1 | MACROGLOBULIN / COMPLEMENT |
| ENSZWYP00000028028.1 | |
| ENSZWYP00000028029.1 | PHOSPHOMANNOMUTASE |
| ENSZWYP00000028030.1 | STERILE20-LIKE KINASE, ISOFORM B-RELATED |
| ENSZWYP00000028031.1 | RING FINGER PROTEIN 219 |
| ENSZWYP00000028032.1 | |
| ENSZWYP00000028033.1 | MACROGLOBULIN / COMPLEMENT |
| ENSZWYP00000028034.1 | SEC31-RELATED PROTEIN |
| ENSZWYP00000028035.1 | FERM DOMAIN CONTAINING PROTEIN |
| ENSZWYP00000028036.1 | STRAWBERRY NOTCH-RELATED |
| ENSZWYP00000028037.1 | POTASSIUM CHANNEL TETRAMERIZATION DOMAIN-CONTAINING |
| ENSZWYP00000028038.1 | STERILE20-LIKE KINASE, ISOFORM B-RELATED |
| ENSZWYP00000028039.1 | |
| ENSZWYP00000028040.1 | ODD-SKIPPED - RELATED |
| ENSZWYP00000028041.1 | |
| ENSZWYP00000028042.1 | UNCHARACTERIZED |
| ENSZWYP00000028043.1 | DDB1- AND CUL4-ASSOCIATED FACTOR 12-RELATED |
| ENSZWYP00000028044.1 | |
| ENSZWYP00000028045.1 | STERILE20-LIKE KINASE, ISOFORM B-RELATED |
| ENSZWYP00000028046.1 | LIPOPOLYSACCHARIDE-INDUCED TUMOR NECROSIS FACTOR-ALPHA FACTOR |
| ENSZWYP00000028047.1 | DUMPY: SHORTER THAN WILD-TYPE |
| ENSZWYP00000028048.1 | POTASSIUM CHANNEL TETRAMERIZATION DOMAIN-CONTAINING |
| ENSZWYP00000028049.1 | |
| ENSZWYP00000028050.1 | STRAWBERRY NOTCH-RELATED |
| ENSZWYP00000028051.1 | PLECKSTRIN HOMOLOGY DOMAIN-CONTAINING FAMILY G MEMBER 7 |
