Lamellibrachia columna is a species of tube worm in the family Siboglinidae, found in deep-sea hydrothermal vents and cold seep ecosystems. This species thrives in extreme environments by relying on a symbiotic relationship with sulfide-oxidizing bacteria housed in its trophosome, a specialized organ. These bacteria convert hydrogen sulfide into organic compounds, providing the worm with essential nutrients. Lamellibrachia columna plays a vital role in deep-sea ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Lamellibrachia columna | Annelida | - | Cold seep | 810-1,870 | cold seeps off the east coast of the North Island of New Zealand | 53616 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| wsLamColu1.1 | 879.7Mb | Chromosome | 2023 | CAVLEN01 | WELLCOME SANGER INSTITUTE | PRJEB68353 | - | 32,318 |
| Gene ID | Description |
|---|---|
| ENSZWYP00000028052.1 | DUMPY: SHORTER THAN WILD-TYPE |
| ENSZWYP00000028053.1 | DIHYDROOROTATE DEHYDROGENASE (QUINONE), MITOCHONDRIAL-RELATED |
| ENSZWYP00000028054.1 | LIPOPOLYSACCHARIDE-INDUCED TUMOR NECROSIS FACTOR-ALPHA FACTOR |
| ENSZWYP00000028055.1 | FERM DOMAIN CONTAINING PROTEIN |
| ENSZWYP00000028056.1 | HECT DOMAIN UBIQUITIN-PROTEIN LIGASE |
| ENSZWYP00000028057.1 | |
| ENSZWYP00000028058.1 | |
| ENSZWYP00000028059.1 | PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 35 |
| ENSZWYP00000028060.1 | DIHYDROOROTATE DEHYDROGENASE (QUINONE), MITOCHONDRIAL-RELATED |
| ENSZWYP00000028061.1 | |
| ENSZWYP00000028062.1 | |
| ENSZWYP00000028063.1 | |
| ENSZWYP00000028064.1 | PLECKSTRIN HOMOLOGY DOMAIN-CONTAINING FAMILY G MEMBER 7 |
| ENSZWYP00000028065.1 | - |
| ENSZWYP00000028066.1 | |
| ENSZWYP00000028067.1 | TRIOSEPHOSPHATE ISOMERASE |
| ENSZWYP00000028068.1 | |
| ENSZWYP00000028069.1 | |
| ENSZWYP00000028070.1 | |
| ENSZWYP00000028071.1 | RAB11-BINDING PROTEIN RELCH |
| ENSZWYP00000028072.1 | CHITINASE |
| ENSZWYP00000028073.1 | TRIOSEPHOSPHATE ISOMERASE |
| ENSZWYP00000028074.1 | SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A 65 KDA REGULATORY SUBUNIT |
| ENSZWYP00000028075.1 | |
| ENSZWYP00000028076.1 | NEUROLIGIN |
| ENSZWYP00000028077.1 | |
| ENSZWYP00000028078.1 | |
| ENSZWYP00000028079.1 | |
| ENSZWYP00000028080.1 | PLECKSTRIN HOMOLOGY DOMAIN-CONTAINING FAMILY G MEMBER 7 |
| ENSZWYP00000028081.1 | TRIOSEPHOSPHATE ISOMERASE |
| ENSZWYP00000028082.1 | |
| ENSZWYP00000028083.1 | EUKARYOTIC TRANSLATION INITIATION FACTOR 4B/4H |
| ENSZWYP00000028084.1 | |
| ENSZWYP00000028085.1 | TF-1 CELL APOPTOSIS RELATED PROTEIN-15 |
| ENSZWYP00000028086.1 | SYNTAXIN |
| ENSZWYP00000028087.1 | FYVE AND COILED-COIL DOMAIN-CONTAINING PROTEIN 1 |
| ENSZWYP00000028088.1 | BICOID-INTERACTING PROTEIN RELATED |
| ENSZWYP00000028089.1 | |
| ENSZWYP00000028090.1 | SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A 65 KDA REGULATORY SUBUNIT |
| ENSZWYP00000028091.1 | RAB11-BINDING PROTEIN RELCH |
| ENSZWYP00000028092.1 | GUANYLYL CYCLASE |
| ENSZWYP00000028093.1 | ZINC FINGER AND SCAN DOMAIN-CONTAINING |
| ENSZWYP00000028094.1 | BICOID-INTERACTING PROTEIN RELATED |
| ENSZWYP00000028095.1 | |
| ENSZWYP00000028096.1 | |
| ENSZWYP00000028097.1 | CHLORIDE CONDUCTANCE REGULATORY PROTEIN ICLN |
| ENSZWYP00000028098.1 | DOCKING PROTEIN RELATED |
| ENSZWYP00000028099.1 | |
| ENSZWYP00000028100.1 | |
| ENSZWYP00000028101.1 | ZNF44 PROTEIN |
