About Synaphobranchus kaupii

Synaphobranchus kaupii, also known as Kaup's arrowtooth eel, is an eel in the family Synaphobranchidae. It is a marine, deep water-dwelling eel which is known from the Indo-Western Pacific and eastern and western Atlantic Ocean. It dwells at a depth range of 120 to 4,800 metres, and inhabits the upper abyssal zone on the continental slope.

Classification

Animalia (Kingdom); Chordata (Phylum); Vertebrata (Subphylum); Gnathostomata (Infraphylum); Osteichthyes (Parvphylum); Actinopterygii (Gigaclass); Actinopteri (Superclass); Teleostei (Class); Anguilliformes (Order); Synaphobranchidae (Family); Synaphobranchinae (Subfamily); Synaphobranchus (Genus); Synaphobranchus kaupii (Species)

Original Name

Synaphobranchus kaupii Johnson, 1862

Original Description/Redescription

1. Yate J. 2. Descriptions of some New Genera and Species of Fishes obtained at Madeira[C]//Proceedings of the Zoological Society of London. Oxford, UK: Blackwell Publishing Ltd, 1862, 30(1): 167-180. (Johnson et al., 1862)

Partial Description

Feed on decapods, natantia, amphipods, fishes and cephalopods

Distribution/Locality

Gulf of Saint Lawrence, North Atlantic Ocean, South Africa at depths of 800- 2000 m


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Synaphobranchus kaupiiChordataKaup's arrowtooth eelDeep sea967Southwest of Taiwan (22°17.466N 119°59.652 E)118154

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
SKAU_1.11.5GbChromosome2023JAINUF01GenoFish - INRAE (Fish Physiology and Genomics laboratory)PRJNA74350397.90 76,800/519.842.5-43,073

References
TitleJournalPubmed ID
Genome structures resolve the early diversification of teleost fishesScience36758078

Gene Information

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Gene IDDescription
SKAU_T00288010
SKAU_T00288020MYOSIN REGULATORY LIGHT CHAIN 2
SKAU_T00288030RAB GTPASE-ACTIVATING PROTEIN 1-LIKE
SKAU_T00288040
SKAU_T00288050RAB GTPASE-ACTIVATING PROTEIN 1-LIKE
SKAU_T00288060
SKAU_T00288070GLYCO_TRANS_2-LIKE DOMAIN-CONTAINING PROTEIN
SKAU_T00288080PHD-TYPE DOMAIN-CONTAINING PROTEIN
SKAU_T00288090GLYCO_TRANS_2-LIKE DOMAIN-CONTAINING PROTEIN
SKAU_T00288100
SKAU_T00288110GLYCO_TRANS_2-LIKE DOMAIN-CONTAINING PROTEIN
SKAU_T00288120CXC2 DOMAIN-CONTAINING PROTEIN
SKAU_T00288130GLYCO_TRANS_2-LIKE DOMAIN-CONTAINING PROTEIN
SKAU_T00288140CXC2 DOMAIN-CONTAINING PROTEIN
SKAU_T00288150GLYCO_TRANS_2-LIKE DOMAIN-CONTAINING PROTEIN
SKAU_T00288160GLYCO_TRANS_2-LIKE DOMAIN-CONTAINING PROTEIN
SKAU_T00288170
SKAU_T00288180OLIGORIBONUCLEASE, MITOCHONDRIAL
SKAU_T00288190PROTEIN CBG26694
SKAU_T00288200NAD DEPENDENT EPIMERASE/DEHYDRATASE
SKAU_T00288210HISTONE-LYSINE N-METHYLTRANSFERASE SETD1
SKAU_T00288220HISTONE-LYSINE N-METHYLTRANSFERASE SETD1
SKAU_T00288230ANTIGEN BSP, PUTATIVE-RELATED
SKAU_T00288240
SKAU_T00288250UNKEMPT FAMILY MEMBER
SKAU_T00288260HISTONE H3
SKAU_T00288270G-PROTEIN COUPLED RECEPTOR 182 AND ESTROGEN RECEPTOR 1
SKAU_T00288280
SKAU_T00288290
SKAU_T00288300G-PROTEIN COUPLED RECEPTOR 182 AND ESTROGEN RECEPTOR 1
SKAU_T00288310
SKAU_T00288320UNC-13-4A, ISOFORM B
SKAU_T00288330UNC-13-4A, ISOFORM B
SKAU_T00288340UBIQUITIN-CONJUGATING ENZYME E2
SKAU_T00288350REVERSE TRANSCRIPTASES
SKAU_T00288360POTASSIUM CHANNEL TETRAMERISATION DOMAIN CONTAINING PROTEIN
SKAU_T00288370SERINE/THREONINE-PROTEIN KINASE
SKAU_T00288380CYTOKINE RECEPTOR
SKAU_T00288390CYTOKINE RECEPTOR
SKAU_T00288400
SKAU_T00288410CYTOKINE RECEPTOR
SKAU_T00288420UBIQUITIN CARBOXYL-TERMINAL HYDROLASE
SKAU_T00288430
SKAU_T00288440ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
SKAU_T00288450UBIQUITIN CARBOXYL-TERMINAL HYDROLASE
SKAU_T00288460
SKAU_T00288470HEPARAN SULFATE SULFOTRANSFERASE
SKAU_T00288480
SKAU_T00288490
SKAU_T00288500HEPARAN SULFATE SULFOTRANSFERASE
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