About Synaphobranchus kaupii

Synaphobranchus kaupii, also known as Kaup's arrowtooth eel, is an eel in the family Synaphobranchidae. It is a marine, deep water-dwelling eel which is known from the Indo-Western Pacific and eastern and western Atlantic Ocean. It dwells at a depth range of 120 to 4,800 metres, and inhabits the upper abyssal zone on the continental slope.

Classification

Animalia (Kingdom); Chordata (Phylum); Vertebrata (Subphylum); Gnathostomata (Infraphylum); Osteichthyes (Parvphylum); Actinopterygii (Gigaclass); Actinopteri (Superclass); Teleostei (Class); Anguilliformes (Order); Synaphobranchidae (Family); Synaphobranchinae (Subfamily); Synaphobranchus (Genus); Synaphobranchus kaupii (Species)

Original Name

Synaphobranchus kaupii Johnson, 1862

Original Description/Redescription

1. Yate J. 2. Descriptions of some New Genera and Species of Fishes obtained at Madeira[C]//Proceedings of the Zoological Society of London. Oxford, UK: Blackwell Publishing Ltd, 1862, 30(1): 167-180. (Johnson et al., 1862)

Partial Description

Feed on decapods, natantia, amphipods, fishes and cephalopods

Distribution/Locality

Gulf of Saint Lawrence, North Atlantic Ocean, South Africa at depths of 800- 2000 m


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Synaphobranchus kaupiiChordataKaup's arrowtooth eelDeep sea967Southwest of Taiwan (22°17.466N 119°59.652 E)118154

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
SKAU_1.11.5GbChromosome2023JAINUF01GenoFish - INRAE (Fish Physiology and Genomics laboratory)PRJNA74350397.90 76,800/519.842.5-43,073

References
TitleJournalPubmed ID
Genome structures resolve the early diversification of teleost fishesScience36758078

Gene Information

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Gene IDDescription
SKAU_T00288510
SKAU_T00288520
SKAU_T00288530
SKAU_T00288540HEPARAN SULFATE SULFOTRANSFERASE
SKAU_T00288550
SKAU_T00288560REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
SKAU_T00288570
SKAU_T00288580HYPOXIA-INDUCIBLE FACTOR 1 ALPHA INHIBITOR-RELATED
SKAU_T00288590NON-SMC ELEMENT 1-RELATED
SKAU_T00288600CYTOKINE RECEPTOR
SKAU_T00288610ET TRANSLATION PRODUCT-RELATED
SKAU_T00288620UBIQUITIN DOMAIN-CONTAINING PROTEIN UBFD1
SKAU_T00288630STEREOCILIN RELATED
SKAU_T00288640RECQ-MEDIATED GENOME INSTABILITY PROTEIN 2 RMI2
SKAU_T00288650LIPOPOLYSACCHARIDE-INDUCED TUMOR NECROSIS FACTOR-ALPHA FACTOR
SKAU_T00288660STANNIN
SKAU_T00288670MICRO-RNA BINDING ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 7
SKAU_T00288680PHOSPHOLIPASE A2 FAMILY MEMBER
SKAU_T00288690
SKAU_T00288700
SKAU_T00288710
SKAU_T00288720UBIQUITIN CARBOXYL-TERMINAL HYDROLASE
SKAU_T00288730
SKAU_T00288740
SKAU_T00288750LEISHMANOLYSIN-LIKE PEPTIDASE
SKAU_T00288760LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED
SKAU_T00288770
SKAU_T00288780MATRIX METALLOPROTEINASE
SKAU_T0028879039S RIBOSOMAL PROTEIN L52, MITOCHONDRIAL
SKAU_T00288800LIM DOMAIN-CONTAINING PROTEIN JUB
SKAU_T00288810APOPTOTIC CHROMATIN CONDENSATION INDUCER IN THE NUCLEUS
SKAU_T00288820APOPTOTIC CHROMATIN CONDENSATION INDUCER IN THE NUCLEUS
SKAU_T00288830CAS SCAFFOLDING PROTEIN
SKAU_T00288840E3 UBIQUITIN-PROTEIN LIGASE TRIM
SKAU_T00288850
SKAU_T00288860
SKAU_T00288870ADAM A DISINTEGRIN AND METALLOPROTEASE DOMAIN
SKAU_T00288880PROTEIN LYSINE HYDROXYLATION COMPLEX COMPONENT
SKAU_T00288890PEPTIDYLPROLYL ISOMERASE
SKAU_T002889005'-NUCLEOTIDASE
SKAU_T00288910LD33804P
SKAU_T00288920KELCH PROTEIN
SKAU_T00288930ATP-CITRATE SYNTHASE
SKAU_T002889402',3'-CYCLIC-NUCLEOTIDE 3'-PHOSPHODIESTERASE
SKAU_T00288950DNAJ HOMOLOG SUBFAMILY C MEMBER 7
SKAU_T00288960
SKAU_T00288970DOUBLE-STRANDED RNA-BINDING ZINC FINGER PROTEIN
SKAU_T00288980HELICASE WITH DEATH DOMAIN-RELATED
SKAU_T00288990-
SKAU_T00289000MULTICOPPER OXIDASE-RELATED
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