About Synaphobranchus kaupii

Synaphobranchus kaupii, also known as Kaup's arrowtooth eel, is an eel in the family Synaphobranchidae. It is a marine, deep water-dwelling eel which is known from the Indo-Western Pacific and eastern and western Atlantic Ocean. It dwells at a depth range of 120 to 4,800 metres, and inhabits the upper abyssal zone on the continental slope.

Classification

Animalia (Kingdom); Chordata (Phylum); Vertebrata (Subphylum); Gnathostomata (Infraphylum); Osteichthyes (Parvphylum); Actinopterygii (Gigaclass); Actinopteri (Superclass); Teleostei (Class); Anguilliformes (Order); Synaphobranchidae (Family); Synaphobranchinae (Subfamily); Synaphobranchus (Genus); Synaphobranchus kaupii (Species)

Original Name

Synaphobranchus kaupii Johnson, 1862

Original Description/Redescription

1. Yate J. 2. Descriptions of some New Genera and Species of Fishes obtained at Madeira[C]//Proceedings of the Zoological Society of London. Oxford, UK: Blackwell Publishing Ltd, 1862, 30(1): 167-180. (Johnson et al., 1862)

Partial Description

Feed on decapods, natantia, amphipods, fishes and cephalopods

Distribution/Locality

Gulf of Saint Lawrence, North Atlantic Ocean, South Africa at depths of 800- 2000 m


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Synaphobranchus kaupiiChordataKaup's arrowtooth eelDeep sea967Southwest of Taiwan (22°17.466N 119°59.652 E)118154

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
SKAU_1.11.5GbChromosome2023JAINUF01GenoFish - INRAE (Fish Physiology and Genomics laboratory)PRJNA74350397.90 76,800/519.842.5-43,073

References
TitleJournalPubmed ID
Genome structures resolve the early diversification of teleost fishesScience36758078

Gene Information

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Gene IDDescription
SKAU_T00294010RETINOIC ACID INDUCED 1/TRANSCRIPTION FACTOR 20
SKAU_T00294020RETINOIC ACID INDUCED 1/TRANSCRIPTION FACTOR 20
SKAU_T00294030EPITHELIAL MEMBRANE PROTEIN-RELATED
SKAU_T00294040EPITHELIAL MEMBRANE PROTEIN-RELATED
SKAU_T00294050
SKAU_T00294060ZONA PELLUCIDA SPERM-BINDING PROTEIN
SKAU_T00294070ZONA PELLUCIDA SPERM-BINDING PROTEIN
SKAU_T00294080CENTROMERE PROTEIN M
SKAU_T00294090RNA AND EXPORT FACTOR BINDING PROTEIN
SKAU_T00294100PHD-TYPE DOMAIN-CONTAINING PROTEIN
SKAU_T00294110PHD-TYPE DOMAIN-CONTAINING PROTEIN
SKAU_T00294120
SKAU_T00294130RNA-BINDING PROTEIN LUC7-RELATED
SKAU_T00294140-
SKAU_T00294150ESSENTIAL MCU REGULATOR, MITOCHONDRIAL
SKAU_T00294160NADH-UBIQUINONE OXIDOREDUCTASE B14 SUBUNIT
SKAU_T00294170PLECKSTRIN HOMOLOGY PH DOMAIN-CONTAINING PROTEIN
SKAU_T00294180
SKAU_T00294190
SKAU_T00294200NUCLEOLAR PROTEIN 12
SKAU_T00294210STEROL REGULATORY ELEMENT-BINDING PROTEIN
SKAU_T00294220GTPASE, IMAP FAMILY MEMBER-RELATED
SKAU_T00294230UNCHARACTERIZED
SKAU_T00294240
SKAU_T00294250GTPASE, IMAP FAMILY MEMBER-RELATED
SKAU_T00294260
SKAU_T00294270UNCHARACTERIZED
SKAU_T00294280BCL2 INTERACTING MEDIATOR OF CELL DEATH
SKAU_T00294290TRANSPOSON TY3-I GAG-POL POLYPROTEIN
SKAU_T00294300UNCHARACTERIZED
SKAU_T00294310GTPASE, IMAP FAMILY MEMBER-RELATED
SKAU_T00294320ER LUMEN PROTEIN RETAINING RECEPTOR
SKAU_T00294330INWARD RECTIFIER POTASSIUM CHANNEL
SKAU_T00294340SOX100B
SKAU_T00294350DNA-DIRECTED RNA POLYMERASE SUBUNIT K
SKAU_T00294360CALPONIN HOMOLOGY DOMAIN-CONTAINING PROTEIN DDB_G0272472-RELATED
SKAU_T00294370GOLGI-LOCALIZED, GAMMA-ADAPTIN EAR CONTAINING, ARF BINDING PROTEIN
SKAU_T00294380ATP-DEPENDENT RNA HELICASE DBP3
SKAU_T00294390CBL
SKAU_T00294400UROPLAKIN II
SKAU_T00294410FORKHEAD BOX PROTEIN R1
SKAU_T00294420COILED-COIL DOMAIN-CONTAINING PROTEIN 84
SKAU_T00294430IONOTROPIC GLUTAMATE RECEPTOR
SKAU_T00294440
SKAU_T00294450
SKAU_T00294460CHROMOBOX PROTEIN
SKAU_T00294470NUCLEAR FACTOR ERYTHROID 2-RELATED FACTOR
SKAU_T00294480ZETA-COAT PROTEIN
SKAU_T00294490BEN DOMAIN-CONTAINING PROTEIN 6
SKAU_T00294500BEN DOMAIN-CONTAINING PROTEIN 6
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