About Synaphobranchus kaupii

Synaphobranchus kaupii, also known as Kaup's arrowtooth eel, is an eel in the family Synaphobranchidae. It is a marine, deep water-dwelling eel which is known from the Indo-Western Pacific and eastern and western Atlantic Ocean. It dwells at a depth range of 120 to 4,800 metres, and inhabits the upper abyssal zone on the continental slope.

Classification

Animalia (Kingdom); Chordata (Phylum); Vertebrata (Subphylum); Gnathostomata (Infraphylum); Osteichthyes (Parvphylum); Actinopterygii (Gigaclass); Actinopteri (Superclass); Teleostei (Class); Anguilliformes (Order); Synaphobranchidae (Family); Synaphobranchinae (Subfamily); Synaphobranchus (Genus); Synaphobranchus kaupii (Species)

Original Name

Synaphobranchus kaupii Johnson, 1862

Original Description/Redescription

1. Yate J. 2. Descriptions of some New Genera and Species of Fishes obtained at Madeira[C]//Proceedings of the Zoological Society of London. Oxford, UK: Blackwell Publishing Ltd, 1862, 30(1): 167-180. (Johnson et al., 1862)

Partial Description

Feed on decapods, natantia, amphipods, fishes and cephalopods

Distribution/Locality

Gulf of Saint Lawrence, North Atlantic Ocean, South Africa at depths of 800- 2000 m


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Synaphobranchus kaupiiChordataKaup's arrowtooth eelDeep sea967Southwest of Taiwan (22°17.466N 119°59.652 E)118154

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
SKAU_1.11.5GbChromosome2023JAINUF01GenoFish - INRAE (Fish Physiology and Genomics laboratory)PRJNA74350397.90 76,800/519.842.5-43,073

References
TitleJournalPubmed ID
Genome structures resolve the early diversification of teleost fishesScience36758078

Gene Information

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Gene IDDescription
SKAU_T00294510
SKAU_T00294520
SKAU_T00294530HOMEOBOX PROTEIN ROUGH-RELATED
SKAU_T00294540PROTEIN ZERKNUELLT 1-RELATED
SKAU_T00294550HOMEOTIC PROTEIN DEFORMED
SKAU_T00294560HOMEOBOX PROTEIN HOX
SKAU_T00294570HOMEOBOX PROTEIN HOX
SKAU_T00294580HOMEOBOX PROTEIN HOX
SKAU_T00294590HOMEOBOX DOMAIN-CONTAINING PROTEIN
SKAU_T00294600AGAP004664-PA
SKAU_T00294610HOMEOBOX PROTEIN ABDOMINAL-B
SKAU_T00294620SEGMENTATION PROTEIN FUSHI TARAZU-LIKE PROTEIN
SKAU_T00294630SEGMENTATION PROTEIN EVEN-SKIPPED
SKAU_T00294640
SKAU_T00294650ATP SYNTHASE LIPID-BINDING PROTEIN, MITOCHONDRIAL
SKAU_T00294660(E3-INDEPENDENT) E2 UBIQUITIN-CONJUGATING ENZYME
SKAU_T00294670
SKAU_T00294680
SKAU_T00294690KH DOMAIN CONTAINING RNA BINDING PROTEIN
SKAU_T00294700ZW10 INTERACTOR ZWINT
SKAU_T00294710NUCLEAR HORMONE RECEPTOR
SKAU_T00294720GUANINE NUCLEOTIDE EXCHANGE FACTOR
SKAU_T00294730NUCLEAR FACTOR I
SKAU_T00294740TELOMERASE RNA COMPONENT INTERACTING RNASE
SKAU_T00294750ARSENICAL PUMP-DRIVING ATPASE ARSENITE-TRANSLOCATING ATPASE
SKAU_T00294760
SKAU_T00294770MITOCHONDRIAL GLYCINE TRANSPORTER
SKAU_T00294780CINGULIN-LIKE PROTEIN 1-RELATED
SKAU_T00294790MYOSIN HEAVY CHAIN, NON-MUSCLE
SKAU_T00294800THIOREDOXIN, MITOCHONDRIAL
SKAU_T00294810CONNECTIVE TISSUE GROWTH FACTOR-RELATED
SKAU_T00294820PURKINJE CELL PROTEIN 2
SKAU_T00294830VESICLE PROTEIN SORTING-ASSOCIATED
SKAU_T00294840VESICLE PROTEIN SORTING-ASSOCIATED
SKAU_T00294850PROTEIN PET100 HOMOLOG, MITOCHONDRIAL
SKAU_T00294860GTPASE, IMAP FAMILY MEMBER-RELATED
SKAU_T00294870GTPASE, IMAP FAMILY MEMBER-RELATED
SKAU_T00294880GTPASE, IMAP FAMILY MEMBER-RELATED
SKAU_T00294890GTPASE, IMAP FAMILY MEMBER-RELATED
SKAU_T00294900
SKAU_T00294910GTPASE, IMAP FAMILY MEMBER-RELATED
SKAU_T00294920GTPASE, IMAP FAMILY MEMBER-RELATED
SKAU_T00294930GTPASE, IMAP FAMILY MEMBER-RELATED
SKAU_T00294940FALZ-RELATED BROMODOMAIN-CONTAINING PROTEINS
SKAU_T00294950
SKAU_T00294960EPOXIDE HYDROLASE
SKAU_T00294970G-PROTEIN COUPLED RECEPTOR
SKAU_T00294980
SKAU_T00294990
SKAU_T00295000KINETOCHORE-ASSOCIATED PROTEIN DSN1 HOMOLOG
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