About Synaphobranchus kaupii

Synaphobranchus kaupii, also known as Kaup's arrowtooth eel, is an eel in the family Synaphobranchidae. It is a marine, deep water-dwelling eel which is known from the Indo-Western Pacific and eastern and western Atlantic Ocean. It dwells at a depth range of 120 to 4,800 metres, and inhabits the upper abyssal zone on the continental slope.

Classification

Animalia (Kingdom); Chordata (Phylum); Vertebrata (Subphylum); Gnathostomata (Infraphylum); Osteichthyes (Parvphylum); Actinopterygii (Gigaclass); Actinopteri (Superclass); Teleostei (Class); Anguilliformes (Order); Synaphobranchidae (Family); Synaphobranchinae (Subfamily); Synaphobranchus (Genus); Synaphobranchus kaupii (Species)

Original Name

Synaphobranchus kaupii Johnson, 1862

Original Description/Redescription

1. Yate J. 2. Descriptions of some New Genera and Species of Fishes obtained at Madeira[C]//Proceedings of the Zoological Society of London. Oxford, UK: Blackwell Publishing Ltd, 1862, 30(1): 167-180. (Johnson et al., 1862)

Partial Description

Feed on decapods, natantia, amphipods, fishes and cephalopods

Distribution/Locality

Gulf of Saint Lawrence, North Atlantic Ocean, South Africa at depths of 800- 2000 m


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Synaphobranchus kaupiiChordataKaup's arrowtooth eelDeep sea967Southwest of Taiwan (22°17.466N 119°59.652 E)118154

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
SKAU_1.11.5GbChromosome2023JAINUF01GenoFish - INRAE (Fish Physiology and Genomics laboratory)PRJNA74350397.90 76,800/519.842.5-43,073

References
TitleJournalPubmed ID
Genome structures resolve the early diversification of teleost fishesScience36758078

Gene Information

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Gene IDDescription
SKAU_T00305010PROTHROMBIN
SKAU_T00305020FOUR-JOINTED BOX PROTEIN 1
SKAU_T00305030B-BOX DOMAIN CONTAINING
SKAU_T00305040
SKAU_T00305050BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR, TWIST
SKAU_T00305060INTERFERON REGULATORY FACTOR
SKAU_T00305070PHD AND RING FINGER DOMAIN-CONTAINING PROTEIN 1
SKAU_T00305080RAS-ASSOCIATING DOMAIN CONTAINING PROTEIN
SKAU_T00305090UNCHARACTERIZED
SKAU_T00305100L-2-HYDROXYCARBOXYLATE DEHYDROGENASE (NAD(P)(+))
SKAU_T00305110TUMOR SUSCEPTIBILITY GENE 101 PROTEIN-RELATED
SKAU_T00305120
SKAU_T00305130
SKAU_T00305140
SKAU_T00305150ALPHA-KETOGLUTARATE-DEPENDENT DIOXYGENASE ALKB HOMOLOG 3
SKAU_T00305160RH59310P
SKAU_T00305170TTC17 PROTEIN
SKAU_T00305180TTC17 PROTEIN
SKAU_T00305190APOPTOSIS INHIBITOR 5-RELATED
SKAU_T00305200TNF RECEPTOR ASSOCIATED FACTOR
SKAU_T00305210TARGET OF RAPAMYCIN COMPLEX 2 SUBUNIT BIT61-RELATED
SKAU_T00305220COMM DOMAIN-CONTAINING PROTEIN 9
SKAU_T00305230L-FUCOSE KINASE
SKAU_T00305240PHOSPHATIDYLINOSITOL SYNTHASE
SKAU_T00305250TRANSIENT RECEPTOR POTENTIAL CATION CHANNEL, SUBFAMILY M, MEMBER 6
SKAU_T00305260
SKAU_T00305270
SKAU_T00305280PROTEIN-TYROSINE-PHOSPHATASE
SKAU_T00305290AROMATIC AMINO ACID HYDROXYLASE
SKAU_T00305300
SKAU_T00305310INSULIN-LIKE GROWTH FACTOR II
SKAU_T00305320
SKAU_T00305330
SKAU_T00305340GLYCOSIDASE FAMILY 31
SKAU_T00305350CARNITINE O-ACYLTRANSFERASE
SKAU_T00305360CYSTEINYL-TRNA SYNTHETASE
SKAU_T00305370TESTIS-SPECIFIC Y-ENCODED PROTEIN
SKAU_T00305380
SKAU_T00305390PLECKSTRIN HOMOLOGY-LIKE DOMAIN, PQ-RICH PROTEIN
SKAU_T00305400
SKAU_T00305410OXYSTEROL-BINDING PROTEIN-RELATED
SKAU_T00305420CYTOKINE RECEPTOR
SKAU_T00305430CYTOKINE RECEPTOR
SKAU_T00305440INTERFERON INDUCIBLE TRANSMEMBRANE PROTEIN
SKAU_T00305450INTERFERON INDUCIBLE TRANSMEMBRANE PROTEIN
SKAU_T00305460INTERFERON INDUCIBLE TRANSMEMBRANE PROTEIN
SKAU_T00305470INTERFERON INDUCIBLE TRANSMEMBRANE PROTEIN
SKAU_T00305480OXIDOREDUCTASE-RELATED
SKAU_T00305490POTASSIUM VOLTAGE-GATED CHANNEL SUBFAMILY KQT MEMBER 4
SKAU_T00305500
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