About Synaphobranchus kaupii

Synaphobranchus kaupii, also known as Kaup's arrowtooth eel, is an eel in the family Synaphobranchidae. It is a marine, deep water-dwelling eel which is known from the Indo-Western Pacific and eastern and western Atlantic Ocean. It dwells at a depth range of 120 to 4,800 metres, and inhabits the upper abyssal zone on the continental slope.

Classification

Animalia (Kingdom); Chordata (Phylum); Vertebrata (Subphylum); Gnathostomata (Infraphylum); Osteichthyes (Parvphylum); Actinopterygii (Gigaclass); Actinopteri (Superclass); Teleostei (Class); Anguilliformes (Order); Synaphobranchidae (Family); Synaphobranchinae (Subfamily); Synaphobranchus (Genus); Synaphobranchus kaupii (Species)

Original Name

Synaphobranchus kaupii Johnson, 1862

Original Description/Redescription

1. Yate J. 2. Descriptions of some New Genera and Species of Fishes obtained at Madeira[C]//Proceedings of the Zoological Society of London. Oxford, UK: Blackwell Publishing Ltd, 1862, 30(1): 167-180. (Johnson et al., 1862)

Partial Description

Feed on decapods, natantia, amphipods, fishes and cephalopods

Distribution/Locality

Gulf of Saint Lawrence, North Atlantic Ocean, South Africa at depths of 800- 2000 m


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Synaphobranchus kaupiiChordataKaup's arrowtooth eelDeep sea967Southwest of Taiwan (22°17.466N 119°59.652 E)118154

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
SKAU_1.11.5GbChromosome2023JAINUF01GenoFish - INRAE (Fish Physiology and Genomics laboratory)PRJNA74350397.90 76,800/519.842.5-43,073

References
TitleJournalPubmed ID
Genome structures resolve the early diversification of teleost fishesScience36758078

Gene Information

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Gene IDDescription
SKAU_T00306510IROQUOIS-CLASS HOMEODOMAIN PROTEIN IRX
SKAU_T00306520
SKAU_T00306530
SKAU_T00306540
SKAU_T00306550MATRIX METALLOPROTEINASE
SKAU_T00306560
SKAU_T00306570SODIUM/CHLORIDE DEPENDENT TRANSPORTER
SKAU_T00306580GTPASE, IMAP FAMILY MEMBER-RELATED
SKAU_T00306590GTPASE, IMAP FAMILY MEMBER-RELATED
SKAU_T00306600GTPASE, IMAP FAMILY MEMBER-RELATED
SKAU_T00306610GTPASE, IMAP FAMILY MEMBER-RELATED
SKAU_T00306620GTPASE, IMAP FAMILY MEMBER-RELATED
SKAU_T00306630GTPASE, IMAP FAMILY MEMBER-RELATED
SKAU_T00306640SOLUTE CARRIER FAMILY 12, CATION COTRANSPORTERS
SKAU_T00306650MICROSOMAL DIPEPTIDASE
SKAU_T00306660E3 UBIQUITIN-PROTEIN LIGASE RNF8
SKAU_T00306670CELL ADHESION MOLECULE
SKAU_T00306680HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN-RELATED
SKAU_T00306690NFAT
SKAU_T00306700LEUCOKININ RECEPTOR-RELATED
SKAU_T00306710CHYMOTRYPSIN-RELATED
SKAU_T00306720
SKAU_T00306730CHYMOTRYPSIN-RELATED
SKAU_T00306740AGOUTI RELATED
SKAU_T00306750VACUOLAR ATP SYNTHASE SUBUNIT AC39
SKAU_T00306760SHORT-CHAIN DEHYDROGENASE/REDUCTASE FAMILY 9C
SKAU_T00306770ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN
SKAU_T00306780P25 ALPHA-RELATED
SKAU_T00306790RHO GUANINE NUCLEOTIDE EXCHANGE FACTOR-RELATED
SKAU_T00306800
SKAU_T00306810
SKAU_T00306820SODIUM/HYDROGEN EXCHANGER
SKAU_T00306830FORMIN HOMOLOGY 2 DOMAIN CONTAINING, ISOFORM I
SKAU_T00306840FORMIN HOMOLOGY 2 DOMAIN CONTAINING, ISOFORM I
SKAU_T00306850
SKAU_T00306860CCAAT/ENHANCER BINDING PROTEIN
SKAU_T00306870G PATCH DOMAIN-CONTAINING PROTEIN 1
SKAU_T00306880TRANSPOSABLE ELEMENT-RELATED
SKAU_T00306890LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED
SKAU_T00306900AMINO ACID TRANSPORTER
SKAU_T00306910RHOPHILIN
SKAU_T00306920CENTROSOMAL PROTEIN OF 89 KDA
SKAU_T00306930E3 UBIQUITIN-PROTEIN LIGASE RNF182
SKAU_T00306940CENTROSOMAL PROTEIN OF 89 KDA
SKAU_T00306950TESTOSTERONE-REGULATED PROTEIN RP2
SKAU_T00306960UNCHARACTERIZED
SKAU_T00306970R-SEVEN BINDING PROTEIN (R7BP) HOMOLOG
SKAU_T00306980ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 27
SKAU_T00306990
SKAU_T00307000CYSTEINE-RICH SECRETORY PROTEIN-RELATED
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