About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_7842-2.8EME1 PROTEIN
Bpl_scaf_7842-3.19SPRY DOMAIN CONTAINING SOCS BOX PROTEIN
Bpl_scaf_7842-3.20ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA
Bpl_scaf_7842-3.21ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA
Bpl_scaf_7842-3.22
Bpl_scaf_7842-3.7HL07962P-RELATED
Bpl_scaf_7842-4.10LD36006P
Bpl_scaf_7842-4.11RIBOSOMAL S SUBUNIT
Bpl_scaf_7842-4.8
Bpl_scaf_7864-0.13
Bpl_scaf_7864-0.14UBIQUITIN CARBOXYL-TERMINAL HYDROLASE
Bpl_scaf_7864-0.3
Bpl_scaf_7864-0.6REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Bpl_scaf_7882-0.13MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 7-RELATED
Bpl_scaf_7893-0.0P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASE
Bpl_scaf_7915-0.12
Bpl_scaf_7915-0.15
Bpl_scaf_7915-0.16
Bpl_scaf_7931-0.6SI:CH211-196P9.1-RELATED
Bpl_scaf_7950-0.13
Bpl_scaf_7950-0.14MUCIN 4-RELATED
Bpl_scaf_7961-0.3BONUS, ISOFORM C-RELATED
Bpl_scaf_7961-0.4BONUS, ISOFORM C-RELATED
Bpl_scaf_7961-0.7
Bpl_scaf_7961-0.8
Bpl_scaf_7970-0.0CELL FATE DETERMINING PROTEIN MAB21-RELATED
Bpl_scaf_7989-0.5
Bpl_scaf_7989-0.6
Bpl_scaf_7996-0.20-
Bpl_scaf_7996-0.23-
Bpl_scaf_7996-0.24
Bpl_scaf_7999-0.0
Bpl_scaf_7999-0.7
Bpl_scaf_8007-0.2
Bpl_scaf_8016-0.1
Bpl_scaf_8016-0.4AGAP001331-PA-RELATED
Bpl_scaf_8031-0.1
Bpl_scaf_8031-0.9
Bpl_scaf_8040-0.15
Bpl_scaf_8040-0.2
Bpl_scaf_8040-0.5
Bpl_scaf_805-0.5SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER
Bpl_scaf_8052-0.0
Bpl_scaf_8052-0.7MYB/SANT-LIKE DNA-BINDING DOMAIN-CONTAINING PROTEIN 4
Bpl_scaf_8064-0.0
Bpl_scaf_8064-0.13
Bpl_scaf_8064-0.5CELL FATE DETERMINING PROTEIN MAB21-RELATED
Bpl_scaf_8078-0.1
Bpl_scaf_8078-0.9VACUOLAR PROTEIN 8
Bpl_scaf_8088-0.23
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