Synaphobranchus kaupii, also known as Kaup's arrowtooth eel, is an eel in the family Synaphobranchidae. It is a marine, deep water-dwelling eel which is known from the Indo-Western Pacific and eastern and western Atlantic Ocean. It dwells at a depth range of 120 to 4,800 metres, and inhabits the upper abyssal zone on the continental slope.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Synaphobranchus kaupii | Chordata | Kaup's arrowtooth eel | Deep sea | 967 | Southwest of Taiwan (22°17.466N 119°59.652 E) | 118154 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| SKAU_1.1 | 1.5Gb | Chromosome | 2023 | JAINUF01 | GenoFish - INRAE (Fish Physiology and Genomics laboratory) | PRJNA743503 | 97.90% | 43,073 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Genome structures resolve the early diversification of teleost fishes | Science | 36758078 |
| Gene ID | Description |
|---|---|
| SKAU_T00370010 | RAB9 EFFECTOR PROTEIN WITH KELCH MOTIFS |
| SKAU_T00370020 | MAP/MICROTUBULE AFFINITY-REGULATING KINASE |
| SKAU_T00370030 | REST COREPRESSOR COREST PROTEIN-RELATED |
| SKAU_T00370040 | N-ALPHA-ACETYLTRANSFERASE 40 |
| SKAU_T00370050 | GALACTOSYLGALACTOSYLXYLOSYLPROTEIN 3-BETA-GLUCURONOSYLTRANSFERASE BETA-1,3-GLUCURONYLTRANSFERASE |
| SKAU_T00370060 | |
| SKAU_T00370070 | ADP-RIBOSYLATION FACTOR-LIKE PROTEIN 2-RELATED |
| SKAU_T00370080 | SERINE/THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B |
| SKAU_T00370090 | GLYCOPROTEIN HORMONE BETA CHAIN |
| SKAU_T00370100 | GLYCOPROTEIN HORMONE ALPHA-2 |
| SKAU_T00370110 | MEMBRANE-ANCHORED JUNCTION PROTEIN MAJIN |
| SKAU_T00370120 | 2,5-DIKETO-D-GLUCONIC ACID REDUCTASE |
| SKAU_T00370130 | BCL2-ASSOCIATED AGONIST OF CELL DEATH |
| SKAU_T00370140 | SODIUM/CALCIUM EXCHANGER |
| SKAU_T00370150 | PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN |
| SKAU_T00370160 | PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN |
| SKAU_T00370170 | PROTEIN PHOSPHATASE 1 INHIBITOR POTENTIATED BY PROTEIN KINASE C |
| SKAU_T00370180 | PEPTIDYLPROLYL ISOMERASE |
| SKAU_T00370190 | BREAST CANCER METASTASIS-SUPPRESSOR 1 |
| SKAU_T00370200 | |
| SKAU_T00370210 | PYRUVATE CARBOXYLASE |
| SKAU_T00370220 | SYNAPTIC ADHESION-LIKE MOLECULE SALM |
| SKAU_T00370230 | SYNAPTIC ADHESION-LIKE MOLECULE SALM |
| SKAU_T00370240 | PYRUVATE CARBOXYLASE |
| SKAU_T00370250 | |
| SKAU_T00370260 | PYRUVATE CARBOXYLASE |
| SKAU_T00370270 | PYRUVATE CARBOXYLASE |
| SKAU_T00370280 | REST COREPRESSOR COREST PROTEIN-RELATED |
| SKAU_T00370290 | CALCIUM BINDING PROTEIN |
| SKAU_T00370300 | 4F2 CELL-SURFACE ANTIGEN HEAVY CHAIN |
| SKAU_T00370310 | RIBOSOMAL PROTEIN S6 KINASE |
| SKAU_T00370320 | |
| SKAU_T00370330 | HOMEOBOX PROTEIN PROSPERO/PROX-1/CEH-26 |
| SKAU_T00370340 | TRANSMEMBRANE PROTEIN 179B |
| SKAU_T00370350 | TRANSMEMBRANE PROTEIN 151 HOMOLOG |
| SKAU_T00370360 | CLASS II CROSSOVER JUNCTION ENDONUCLEASE MUS81 |
| SKAU_T00370370 | ZINC FINGER PROTEIN WITH KRAB AND SCAN DOMAINS |
| SKAU_T00370380 | COFILIN-RELATED |
| SKAU_T00370390 | GUANYLATE BINDING PROTEIN |
| SKAU_T00370400 | FORKHEAD BOX PROTEIN N3-LIKE PROTEIN-RELATED |
| SKAU_T00370410 | YIP1 INTERACTING FACTOR HOMOLOG YIF1 PROTEIN |
| SKAU_T00370420 | FOS TRANSCRIPTION FACTOR-RELATED |
| SKAU_T00370430 | RE60986P |
| SKAU_T00370440 | ACIDIC FIBROBLAST GROWTH FACTOR INTRACELLULAR BINDING PROTEIN |
| SKAU_T00370450 | EGF-LIKE DOMAIN-CONTAINING PROTEIN |
| SKAU_T00370460 | HYPOXIA-INDUCIBLE FACTOR 1 ALPHA |
| SKAU_T00370470 | 60S RIBOSOMAL PROTEIN L12 |
| SKAU_T00370480 | - |
| SKAU_T00370490 | PREFOLDIN SUBUNIT 6 |
| SKAU_T00370500 | BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR, HES-RELATED |
