Synaphobranchus kaupii, also known as Kaup's arrowtooth eel, is an eel in the family Synaphobranchidae. It is a marine, deep water-dwelling eel which is known from the Indo-Western Pacific and eastern and western Atlantic Ocean. It dwells at a depth range of 120 to 4,800 metres, and inhabits the upper abyssal zone on the continental slope.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Synaphobranchus kaupii | Chordata | Kaup's arrowtooth eel | Deep sea | 967 | Southwest of Taiwan (22°17.466N 119°59.652 E) | 118154 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| SKAU_1.1 | 1.5Gb | Chromosome | 2023 | JAINUF01 | GenoFish - INRAE (Fish Physiology and Genomics laboratory) | PRJNA743503 | 97.90% | 43,073 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Genome structures resolve the early diversification of teleost fishes | Science | 36758078 |
| Gene ID | Description |
|---|---|
| SKAU_T00371510 | |
| SKAU_T00371520 | TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 6 |
| SKAU_T00371530 | CALPAIN |
| SKAU_T00371540 | CALPAIN |
| SKAU_T00371550 | SI:DKEY-19B23.12-RELATED |
| SKAU_T00371560 | SI:DKEY-19B23.12-RELATED |
| SKAU_T00371570 | CYTIDINE DEAMINASE |
| SKAU_T00371580 | TETRATRICOPEPTIDE REPEAT PROTEIN 11 TPR REPEAT PROTEIN 11 |
| SKAU_T00371590 | CLAUDIN |
| SKAU_T00371600 | LD25575P |
| SKAU_T00371610 | SMALL NUCLEAR RIBONUCLEOPROTEIN-ASSOCIATED PROTEIN B AND N |
| SKAU_T00371620 | UNCHARACTERIZED |
| SKAU_T00371630 | CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 3-RELATED-RELATED |
| SKAU_T00371640 | DIAMINE N-ACETYLTRANSFERASE |
| SKAU_T00371650 | PHOSPHOTYROSINE INTERACTION DOMAIN-CONTAINING FAMILY MEMBER |
| SKAU_T00371660 | SI:DKEY-19B23.7 |
| SKAU_T00371670 | SI:DKEY-19B23.11-RELATED |
| SKAU_T00371680 | SI:DKEY-19B23.11-RELATED |
| SKAU_T00371690 | SI:DKEY-19B23.11-RELATED |
| SKAU_T00371700 | |
| SKAU_T00371710 | GUANINE NUCLEOTIDE EXCHANGE FACTOR |
| SKAU_T00371720 | SCP160 |
| SKAU_T00371730 | NEURALIZED |
| SKAU_T00371740 | G PROTEIN-COUPLED RECEPTOR KINASE/RIBOSOMAL PROTEIN S6 KINASE |
| SKAU_T00371750 | LAMININ G-LIKE DOMAIN-CONTAINING PROTEIN |
| SKAU_T00371760 | ZINC FINGER PROTEIN |
| SKAU_T00371770 | DNA-DIRECTED RNA POLYMERASE |
| SKAU_T00371780 | VILLIN |
| SKAU_T00371790 | E3 UBIQUITIN-PROTEIN LIGASE TRIM |
| SKAU_T00371800 | KILLER CELL LECTIN-LIKE RECEPTOR SUBFAMILY F MEMBER 2 |
| SKAU_T00371810 | THAP DOMAIN-CONTAINING PROTEIN 6 |
| SKAU_T00371820 | CELLULAR TUMOR ANTIGEN P53 |
| SKAU_T00371830 | |
| SKAU_T00371840 | SOLUTE CARRIER FAMILY 2 |
| SKAU_T00371850 | COLD SHOCK DOMAIN CONTAINING PROTEINS |
| SKAU_T00371860 | TRANSLATION INITIATION FACTOR 5A FAMILY MEMBER |
| SKAU_T00371870 | G PROTEIN PATHWAY SUPPRESSOR 2 |
| SKAU_T00371880 | DULLARD PROTEIN PHOSPHATASE |
| SKAU_T00371890 | ELONGATOR COMPLEX PROTEIN 5 |
| SKAU_T00371900 | UNCHARACTERIZED |
| SKAU_T00371910 | |
| SKAU_T00371920 | PHOSPHOLIPID SCRAMBLASE-RELATED |
| SKAU_T00371930 | TYROSINE-PROTEIN KINASE |
| SKAU_T00371940 | SENTRIN/SUMO-SPECIFIC PROTEASE |
| SKAU_T00371950 | ATP-DEPENDENT RNA HELICASE DBP3 |
| SKAU_T00371960 | SOX TRANSCRIPTION FACTOR |
| SKAU_T00371970 | MANNOSE-P-DOLICHOL UTILIZATION DEFECT 1 LEC35 -RELATED |
| SKAU_T00371980 | UNCHARACTERIZED |
| SKAU_T00371990 | TRANSMEMBRANE 4 L6 FAMILY MEMBER 1-RELATED |
| SKAU_T00372000 | G-PROTEIN COUPLED RECEPTOR |
