About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides26548GTPASE, IMAP FAMILY MEMBER-RELATED
Paelopatides26549-
Paelopatides26550INTEGRASE CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides26551PHOSPHATIDYLINOSITOL SYNTHASE
Paelopatides26552SI:CH211-196P9.1-RELATED
Paelopatides26553ZGC:195170
Paelopatides26554-
Paelopatides26555FIBRONECTIN TYPE-III DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides26556RAD25/XP-B DNA REPAIR HELICASE
Paelopatides26557PROTEIN CBG26694
Paelopatides26558-
Paelopatides26559UNNAMED PRODUCT
Paelopatides26560REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides26561ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides26562-
Paelopatides26563-
Paelopatides26565ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides26566-
Paelopatides26567-
Paelopatides26568ENDONUCLEASE-RELATED
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