About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides26434-
Paelopatides26435TRANSCRIPTASE, PUTATIVE-RELATED-RELATED
Paelopatides26436-
Paelopatides26437CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides26438REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides26439GNAT FAMILY N-ACETYLTRANSFERASE
Paelopatides26440POL PROTEIN
Paelopatides26441ENDONUCLEASE-RELATED
Paelopatides26442DNA REPAIR PROTEIN REV1
Paelopatides26443DNA REPAIR PROTEIN REV1
Paelopatides26444TRANSPOSON
Paelopatides26445SOLUTE CARRIER FAMILY 22 MEMBER
Paelopatides26446MIDASIN-RELATED
Paelopatides26448PROTEIN CBG26694
Paelopatides26449-
Paelopatides26450PDF RECEPTOR-LIKE PROTEIN-RELATED
Paelopatides26451FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides26452-
Paelopatides26453GAG-RELATED PROTEIN
Paelopatides2645452 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED
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