About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_11334-4.45S-ADENOSYLMETHIONINE MITOCHONDRIAL CARRIER PROTEIN
Bpl_scaf_11341-0.0
Bpl_scaf_11341-0.29ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 39-RELATED
Bpl_scaf_11364-0.1
Bpl_scaf_11374-0.1
Bpl_scaf_11384-0.16NEPHRIN
Bpl_scaf_11384-0.17
Bpl_scaf_11402-0.15CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN
Bpl_scaf_11402-0.17NEPHRIN
Bpl_scaf_11402-0.6
Bpl_scaf_11402-0.7
Bpl_scaf_11402-0.9EXPRESSED PROTEIN
Bpl_scaf_11412-0.14VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED
Bpl_scaf_11416-0.12
Bpl_scaf_11416-0.13
Bpl_scaf_1142-0.12G-PROTEIN COUPLED RECEPTOR
Bpl_scaf_1142-0.15
Bpl_scaf_1142-0.5
Bpl_scaf_1142-0.6
Bpl_scaf_1142-0.8VON WILLEBRAND FACTOR A DOMAIN-CONTAINING PROTEIN 5A
Bpl_scaf_1142-0.9G-PROTEIN COUPLED RECEPTOR
Bpl_scaf_11435-0.5LITHOSTATHINE
Bpl_scaf_11435-0.6LITHOSTATHINE
Bpl_scaf_11451-0.15DELTEX-RELATED
Bpl_scaf_11451-0.6
Bpl_scaf_11451-0.9PARP/ZINC FINGER CCCH TYPE DOMAIN CONTAINING PROTEIN
Bpl_scaf_11460-0.4UNCHARACTERIZED
Bpl_scaf_11460-0.5RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR
Bpl_scaf_1147-0.11PIKACHURIN-LIKE PROTEIN
Bpl_scaf_1147-0.3
Bpl_scaf_11470-0.2
Bpl_scaf_11470-0.23PROPERDIN
Bpl_scaf_11481-0.11VON WILLEBRAND FACTOR A DOMAIN-CONTAINING PROTEIN 5A
Bpl_scaf_11481-0.12UNCHARACTERIZED
Bpl_scaf_11481-0.7GH08155P
Bpl_scaf_11482-1.3UNCHARACTERIZED
Bpl_scaf_11482-2.30TUBULIN POLYGLUTAMYLASE
Bpl_scaf_11482-2.33
Bpl_scaf_11482-2.34KINETOCHORE SCAFFOLD 1
Bpl_scaf_11482-2.35LYSOPHOSPHOLIPASE-RELATED
Bpl_scaf_11482-3.1GLYCOPROTEIN HORMONE RECEPTOR
Bpl_scaf_11482-5.2ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
Bpl_scaf_11482-5.4-
Bpl_scaf_11482-5.6SPROUTY-RELATED, EVH1 DOMAIN-CONTAINING PROTEIN FAMILY MEMBER
Bpl_scaf_11491-0.13OS10G0105400 PROTEIN
Bpl_scaf_11491-0.4OS10G0105400 PROTEIN
Bpl_scaf_11503-0.16
Bpl_scaf_11503-0.2
Bpl_scaf_11503-0.4RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR
Bpl_scaf_11503-0.7LP21163P
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