About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_11609-0.0
Bpl_scaf_11609-0.4
Bpl_scaf_11609-0.8
Bpl_scaf_11609-1.16
Bpl_scaf_11609-1.24
Bpl_scaf_11609-1.30
Bpl_scaf_11609-1.31G PROTEIN-COUPLED RECEPTOR 157-RELATED
Bpl_scaf_11609-1.32
Bpl_scaf_11609-1.8G PROTEIN-COUPLED RECEPTOR 157-RELATED
Bpl_scaf_11619-0.2
Bpl_scaf_11619-0.3PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Bpl_scaf_11619-1.12
Bpl_scaf_11619-1.14SOLUTE CARRIER FAMILY 39 ZINC TRANSPORTER , MEMBER 9-RELATED
Bpl_scaf_11619-1.15
Bpl_scaf_11619-1.8
Bpl_scaf_11624-0.3
Bpl_scaf_11625-0.2GLUTAMATE DECARBOXYLASE-RELATED
Bpl_scaf_11625-1.11COLLAGEN ALPHA
Bpl_scaf_11625-1.12TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN
Bpl_scaf_11625-1.9TRANSMEMBRANE PROTEIN 169
Bpl_scaf_11635-1.12BONUS, ISOFORM C-RELATED
Bpl_scaf_11635-1.16PAX6 NEIGHBOR PROTEIN PAXNEB
Bpl_scaf_11635-1.30SULFOTRANSFERASE SULT
Bpl_scaf_11635-1.31
Bpl_scaf_11635-1.6
Bpl_scaf_11635-1.9HEAT SHOCK PROTEIN HSP-12.2-RELATED
Bpl_scaf_11636-0.14
Bpl_scaf_11636-1.11ALKALINE PHOSPHATASE
Bpl_scaf_11636-1.13UREASE
Bpl_scaf_11636-1.25CYTIDINE DEAMINASE
Bpl_scaf_11636-1.6UREASE ACCESSORY PROTEIN G
Bpl_scaf_11636-1.9ALKALINE PHOSPHATASE
Bpl_scaf_11638-0.0
Bpl_scaf_11642-0.1
Bpl_scaf_11642-0.2
Bpl_scaf_11644-0.12SEMAPHORIN
Bpl_scaf_11644-0.15
Bpl_scaf_11644-0.6
Bpl_scaf_11644-1.0TRANSPOSABLE ELEMENT-RELATED
Bpl_scaf_11644-1.1
Bpl_scaf_11644-1.6AGAP001331-PA-RELATED
Bpl_scaf_11649-0.8WD REPEAT-CONTAINING PROTEIN 97
Bpl_scaf_11649-0.9
Bpl_scaf_11657-0.0
Bpl_scaf_11662-0.5NETRIN RECEPTOR UNC5
Bpl_scaf_11662-1.40SCAVENGER RECEPTOR DOMAIN-CONTAINING
Bpl_scaf_11662-1.41SRCR DOMAIN-CONTAINING PROTEIN
Bpl_scaf_11662-1.42
Bpl_scaf_11662-1.6TESTICULAR HAPLOID EXPRESSED GENE PROTEIN
Bpl_scaf_11663-1.12SUPEROXIDE DISMUTASE CU-ZN -RELATED
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