About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides42073-
Paelopatides42074-
Paelopatides42075-
Paelopatides42076-
Paelopatides42077-
Paelopatides42078TRACE AMINE-ASSOCIATED RECEPTOR 19N-RELATED
Paelopatides42079ADRENERGIC RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
Paelopatides42080PROTEIN, PUTATIVE-RELATED
Paelopatides42081-
Paelopatides42082-
Paelopatides42084PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-RELATED
Paelopatides42085-
Paelopatides42086U3 SMALL NUCLEOLAR RIBONUCLEOPROTEIN PROTEIN IMP4
Paelopatides42087CORONIN
Paelopatides42089COLORECTAL MUTANT CANCER PROTEIN MCC PROTEIN -RELATED
Paelopatides42090ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
Paelopatides42091SOLUTE CARRIER FAMILY 22 MEMBER
Paelopatides42092CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides42093-
Paelopatides42094E3 UBIQUITIN-PROTEIN LIGASE MARCH 2/3 FAMILY MEMBER
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