About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

<< First 1956 1957 1958 1959 1960 1961 1962 1963 1964 1965 Forward> Last>>        2877 pages in total

Gene IDDescription
Paelopatides42011-
Paelopatides42012HEME-BINDING PROTEIN-RELATED
Paelopatides42013UNCHARACTERIZED
Paelopatides42014DRONGO, ISOFORM F
Paelopatides42015PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides42016DRONGO, ISOFORM F
Paelopatides42017CALCIUM-BINDING PROTEIN 8-RELATED
Paelopatides42018-
Paelopatides42019RAS-RELATED PROTEIN RAB
Paelopatides42020REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides42021NACHT DOMAIN-CONTAINING PROTEIN
Paelopatides42022ACETYL-COA C-ACYLTRANSFERASE
Paelopatides42023-
Paelopatides42024FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides42025CDK-ACTIVATING KINASE ASSEMBLY FACTOR MAT1
Paelopatides42026TRNA METHYLTRANSFERASE
Paelopatides42027AMINO ACID TRANSPORTER
Paelopatides42028-
Paelopatides42029MATRIX METALLOPROTEINASE
Paelopatides42030ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
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