About Bathynomus jamesi

Bathynomus jamesi is widely distributed across different environments including the deep-sea and as such are a useful model for studying adaptation, migration, and speciation. They have larger body size than their shallow water relatives and have large stomachs and fat bodies presumably to store organic reserves. To adapt to the benthic environment, they adopt a burrowing behavior . They have developed an oversized stomach, which can take approximately 2/3 of the whole body cavity when it fills up with food. In addition, they are well known for their extremely long fasting state, which should be the longest record to date. Larger animals usually have greater absolute energy requirements.

Classification

Animalia (Kingdom); Arthropoda (Phylum); Crustacea (Subphylum); Multicrustacea (Superclass); Malacostraca (Class); Eumalacostraca (Subclass); Peracarida (Superorder); Isopoda (Order); Cymothoida (Suborder); Cymothooidea (Superfamily); Cirolanidae (Family); Bathynomus (Genus); Bathynomus jamesi (Species)

Original Name

Bathynomus jamesi Kou, Chen & Li in Kou, Q., Chen, J., Li, X., He, L. & Wang, Y., 2017

Original Description/Redescription

1. Kou Q, Chen J, Li X, et al. New species of the giant deep‐sea isopod genus Bathynomus (Crustacea, Isopoda, Cirolanidae) from Hainan Island, South China Sea[J]. Integrative zoology, 2017, 12(4): 283-291. (Kou et al., 2017)
2. Huang M C, Kawai T, Bruce N L. A new species of Bathynomus Milne-Edwards, 1879 (Isopoda: Cirolanidae) from the southern Gulf of Mexico with a redescription of Bathynomus jamesi Kou, Chen and Li, 2017 from off Pratas Island, Taiwan[J]. Journal of Natural History, 2022, 56(13-16): 885-921. (Huang et al., 2022)

Partial Description

Holotype, 1 immature female (to-tal length [TL] 114 mm). Pleotelson with 11 or 13 short, straightspines; central spine not bifid. Uropod with endopodand exopod distolateral corner slightly produced. Cly-peus lateral margins concave, narrowly rounded apical-ly. Antennal flagellum extending to within pereonite 3. Body suboval, total length(114 mm) approximately 2.2 times as long as maximalwidth (53 mm)

Etymology

The species is named after Dr James K.Lowry in recognition of his great contribution to thecrustacean taxonomy

Distribution/Locality

Gulf of Aden, north-western IndianOcean and northern South China Sea, western PacificOcean at a depth of 563–898 m


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Bathynomus jamesiArthropoda-Hydrothermal vent898near Hainan Island, in the northern South China Sea (17° 46.845′ N, 110° 38.217′ E)1955234

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
ASM2301448v15.89GbContig2022JAJOZX01Institute of Oceanology, Chinese Academy of SciencesPRJNA77607694.80 586.537.2885.3223,221

References
TitleJournalPubmed ID
Genome of a giant isopod, Bathynomus jamesi, provides insights into body size evolution and adaptation to deep-sea environmentBMC Biology35562825

Gene Information

<< First 240 241 242 243 244 245 246 247 248 249 Forward> Last>>        465 pages in total

Gene IDDescription
mRNA.BJAM.scaffold3488.13929RHO FAMILY GTPASE
mRNA.BJAM.scaffold3488.13930TYROSINE-PROTEIN KINASE HOPSCOTCH
mRNA.BJAM.scaffold3488.13931
mRNA.BJAM.scaffold3488.13932TYROSINE-PROTEIN KINASE RECEPTOR
mRNA.BJAM.scaffold349.2631CRYPTOCHROME
mRNA.BJAM.scaffold349.2632ACETYL-COENZYME A SYNTHETASE
mRNA.BJAM.scaffold349.2633ACETYL-COENZYME A SYNTHETASE
mRNA.BJAM.scaffold349.2634ACETYL-COENZYME A SYNTHETASE
mRNA.BJAM.scaffold349.263560S RIBOSOMAL PROTEIN L12
mRNA.BJAM.scaffold349.2636
mRNA.BJAM.scaffold3490.13933-
mRNA.BJAM.scaffold3491.13934UNCHARACTERIZED
mRNA.BJAM.scaffold3491.13935SYNTENIN RELATED
mRNA.BJAM.scaffold3491.13936HYPOXANTHINE-GUANINE PHOSPHORIBOSYLTRANSFERASE
mRNA.BJAM.scaffold3491.13937COILED-COIL-HELIX-COILED-COIL-HELIX DOMAIN CONTAINING 2/NUR77
mRNA.BJAM.scaffold3492.13938OXIDASE/PEROXIDASE
mRNA.BJAM.scaffold3492.13939DNA TOPOISOMERASE/GYRASE
mRNA.BJAM.scaffold3492.13940UNCHARACTERIZED
mRNA.BJAM.scaffold3492.13941
mRNA.BJAM.scaffold3493.13942MICROTUBULE-ASSOCIATED PROTEIN
mRNA.BJAM.scaffold3494.13943UBIQUITIN-ASSOCIATED DOMAIN-CONTAINING PROTEIN 1
mRNA.BJAM.scaffold3494.13944UBIQUITIN-ASSOCIATED DOMAIN-CONTAINING PROTEIN 1
mRNA.BJAM.scaffold3494.13945
mRNA.BJAM.scaffold3494.13946RAS-ASSOCIATING DOMAIN CONTAINING PROTEIN
mRNA.BJAM.scaffold3494.13947UBIQUITIN-CONJUGATING ENZYME E2
mRNA.BJAM.scaffold3494.13948
mRNA.BJAM.scaffold3497.13949
mRNA.BJAM.scaffold3497.13950CONTACTIN 5
mRNA.BJAM.scaffold3499.13951N-ACETYLTRANSFERASE-RELATED
mRNA.BJAM.scaffold3499.13952PARATHYROID HORMONE-RESPONSIVE B1 GENE
mRNA.BJAM.scaffold3499.13953UNCHARACTERIZED
mRNA.BJAM.scaffold350.2637
mRNA.BJAM.scaffold350.2638
mRNA.BJAM.scaffold350.2639
mRNA.BJAM.scaffold350.2640AGAP007537-PB
mRNA.BJAM.scaffold350.2641DNA-DIRECTED RNA POLYMERASE III
mRNA.BJAM.scaffold350.2642
mRNA.BJAM.scaffold350.2643TRANSCRIPTIONAL REPRESSOR CTCFL-RELATED
mRNA.BJAM.scaffold350.2644ACIREDUCTONE DIOXYGENASE
mRNA.BJAM.scaffold350.2645
mRNA.BJAM.scaffold350.2646AXONEMAL INNER ARM DYNEIN LIGHT CHAIN 28
mRNA.BJAM.scaffold3501.13954PEPTIDYL-TRNA HYDROLASE 2
mRNA.BJAM.scaffold3501.13955
mRNA.BJAM.scaffold3504.13956PITUITARY HOMEOBOX HOMOLOG PTX1
mRNA.BJAM.scaffold3504.13957PITUITARY HOMEOBOX HOMOLOG PTX1
mRNA.BJAM.scaffold3507.1395860S RIBOSOMAL PROTEIN L35A
mRNA.BJAM.scaffold3508.13959CXC DOMAIN-CONTAINING PROTEIN-RELATED
mRNA.BJAM.scaffold3508.13960PROTEIN PHOSPHATASE 2C
mRNA.BJAM.scaffold3508.13961PROTEIN PHOSPHATASE 2C
mRNA.BJAM.scaffold351.2647
TOP