The Atlantic deep-sea scallop Placopecten magellanicus is a species in the family Pectinidae. And they are a commercially important pectinid bivalve mollusk native to the northwest Atlantic Ocean. In addition, they are found on the continental shelf of the northwest Atlantic from the north shore of the Gulf of St. Lawrence south to Cape Hatteras, North Carolina.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Placopecten magellanicus | Mollusca | deep-sea scallop | Hydrothermal vent | 0-384 | Dalian in the Liaoning Province of China (38.43 N 120.91 E) | 6577 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 1.83Gb | Chromosome | 2023 | - | Dalian Key Laboratory of Genetic Resources for Marine Shellfish, Liaoning Ocean and Fisheries Science Research Institute | PRJNA923123 | 94.10% | 28,111 |
Title | Journal | Pubmed ID |
---|---|---|
Chromosome-level genome assembly of sea scallop Placopecten magellanicus provides insights into the genetic characteristics and adaptive evolution of large scallops | Genomics | 37977331 |
Gene ID | Description |
---|---|
PMEG.utg000047l.75 | COPINE |
PMEG.utg000047l.76 | POTASSIUM VOLTAGE-GATED CHANNEL SUBFAMILY KQT MEMBER 4 |
PMEG.utg000047l.77 | KINESIN-LIKE PROTEIN KLP-3 |
PMEG.utg000047l.78 | TUBULIN--TYROSINE LIGASE-LIKE PROTEIN 12 |
PMEG.utg000047l.79 | ATP SYNTHASE DELTA CHAIN |
PMEG.utg000047l.8 | MULTICOPPER OXIDASE-RELATED |
PMEG.utg000047l.80 | ALPHA KINASE/ELONGATION FACTOR 2 KINASE |
PMEG.utg000047l.81 | TRANSIENT RECEPTOR POTENTIAL ION CHANNEL PROTEIN |
PMEG.utg000047l.82 | RNA HELICASE |
PMEG.utg000047l.83 | |
PMEG.utg000047l.84 | BETA-CAROTENE DIOXYGENASE |
PMEG.utg000047l.85 | BETA-CAROTENE DIOXYGENASE |
PMEG.utg000047l.86 | SULFOTRANSFERASE SULT |
PMEG.utg000047l.87 | SULFOTRANSFERASE SULT |
PMEG.utg000047l.88 | UFM1-SPECIFIC PROTEASE 2 |
PMEG.utg000047l.89 | BTK-BINDING PROTEIN-RELATED |
PMEG.utg000047l.9 | MULTICOPPER OXIDASE-RELATED |
PMEG.utg000047l.90 | TIAM (MAMMALIAN TUMOR INVASION AND METASTASIS FACTOR) HOMOLOG |
PMEG.utg000047l.91 | MASK PROTEIN |
PMEG.utg000047l.92 | SPLICING FACTOR SF3A-RELATED |
PMEG.utg000047l.93 | BIOGENESIS OF LYSOSOME-RELATED ORGANELLES COMPLEX 1 SUBUNIT 3 |
PMEG.utg000047l.94 | REGULATOR-RELATED |
PMEG.utg000047l.95 | |
PMEG.utg000047l.96 | ARGININE-TRNA-PROTEIN TRANSFERASE 1 |
PMEG.utg000047l.97 | 2-OXOISOVALERATE DEHYDROGENASE SUBUNIT BETA-RELATED |
PMEG.utg000048l.1 | T-CELL ACTIVATION RHO GTPASE ACTIVATING PROTEIN-RELATED |
PMEG.utg000048l.10 | SPONDIN |
PMEG.utg000048l.100 | TRANSCRIPTION INITIATION FACTOR IIE, ALPHA SUBUNIT |
PMEG.utg000048l.101 | ACETYLTRANSFERASE |
PMEG.utg000048l.102 | |
PMEG.utg000048l.103 | SERINE-TYPE ENDOPEPTIDASE INHIBITOR |
PMEG.utg000048l.104 | |
PMEG.utg000048l.105 | POLYCOMB GROUP PROTEIN |
PMEG.utg000048l.106 | SUGAR HYDROLASE-RELATED |
PMEG.utg000048l.107 | SPERMATOGENESIS-ASSOCIATED SERINE-RICH PROTEIN 1 |
PMEG.utg000048l.108 | |
PMEG.utg000048l.109 | MAP/MICROTUBULE AFFINITY-REGULATING KINASE |
PMEG.utg000048l.11 | UNCHARACTERIZED |
PMEG.utg000048l.110 | |
PMEG.utg000048l.111 | RNA-BINDING MOTIF PROTEIN 14B |
PMEG.utg000048l.112 | TUBBY-RELATED |
PMEG.utg000048l.113 | CHROMATIN ASSEMBLY FACTOR 1 SUBUNIT B |
PMEG.utg000048l.114 | DYNEIN HEAVY CHAIN 1, AXONEMAL-LIKE PROTEIN |
PMEG.utg000048l.115 | CYCLIC AMP RESPONSE ELEMENT-BINDING PROTEIN A |
PMEG.utg000048l.116 | BCL-2 RELATED |
PMEG.utg000048l.117 | SODIUM/CHLORIDE DEPENDENT TRANSPORTER |
PMEG.utg000048l.118 | CYSTEINE AND HISTIDINE-RICH DOMAIN-CONTAINING PROTEIN 1 |
PMEG.utg000048l.119 | |
PMEG.utg000048l.12 | T-CELL ACTIVATION RHO GTPASE ACTIVATING PROTEIN-RELATED |
PMEG.utg000048l.120 | TETRATRICOPEPTIDE REPEAT PROTEIN 22 |