The Atlantic deep-sea scallop Placopecten magellanicus is a species in the family Pectinidae. And they are a commercially important pectinid bivalve mollusk native to the northwest Atlantic Ocean. In addition, they are found on the continental shelf of the northwest Atlantic from the north shore of the Gulf of St. Lawrence south to Cape Hatteras, North Carolina.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Placopecten magellanicus | Mollusca | deep-sea scallop | Hydrothermal vent | 0-384 | Dalian in the Liaoning Province of China (38.43 N 120.91 E) | 6577 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 1.83Gb | Chromosome | 2023 | - | Dalian Key Laboratory of Genetic Resources for Marine Shellfish, Liaoning Ocean and Fisheries Science Research Institute | PRJNA923123 | 94.10% | 28,111 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Chromosome-level genome assembly of sea scallop Placopecten magellanicus provides insights into the genetic characteristics and adaptive evolution of large scallops | Genomics | 37977331 |
| Gene ID | Description |
|---|---|
| PMEG.utg000040l.17 | LEUCINE-RICH REPEAT, ISOFORM F-RELATED |
| PMEG.utg000040l.18 | ACTIN |
| PMEG.utg000040l.19 | ATP-DEPENDENT RNA HELICASE |
| PMEG.utg000040l.2 | SOLEUCYL-TRNA SYNTHETASE |
| PMEG.utg000040l.20 | SYNAPTOTAGMIN 14, ISOFORM D |
| PMEG.utg000040l.21 | LEUCINE RICH REPEAT FAMILY PROTEIN |
| PMEG.utg000040l.22 | CEREBELLIN-RELATED |
| PMEG.utg000040l.3 | UNCHARACTERIZED |
| PMEG.utg000040l.4 | MAP/MICROTUBULE AFFINITY-REGULATING KINASE |
| PMEG.utg000040l.5 | 30S RIBOSOMAL PROTEIN S1 |
| PMEG.utg000040l.6 | DNA REPAIR PROTEIN XRCC3 |
| PMEG.utg000040l.7 | RAB3-GAP REGULATORY DOMAIN |
| PMEG.utg000040l.8 | CYSTATHIONINE BETA-SYNTHASE |
| PMEG.utg000040l.9 | - |
| PMEG.utg000041l.1 | |
| PMEG.utg000041l.10 | MITOCHONDRIAL RNA PSEUDOURIDINE SYNTHASE |
| PMEG.utg000041l.11 | MULTIDRUG RESISTANCE PROTEIN |
| PMEG.utg000041l.13 | |
| PMEG.utg000041l.14 | AMINO ACID TRANSPORTER |
| PMEG.utg000041l.15 | E3 UBIQUITIN-PROTEIN LIGASE ZNRF1-LIKE PROTEIN |
| PMEG.utg000041l.16 | DOCKING PROTEIN RELATED |
| PMEG.utg000041l.17 | GTP-BINDING PROTEIN ALPHA SUBUNIT |
| PMEG.utg000041l.18 | ZINC FINGER, RING/FYVE/PHD-TYPE |
| PMEG.utg000041l.19 | PROTEIN-GLUTAMINE GAMMA-GLUTAMYLTRANSFERASE |
| PMEG.utg000041l.2 | ADENINE PHOSPHORIBOSYLTRANSFERASE |
| PMEG.utg000041l.20 | |
| PMEG.utg000041l.21 | TAX1 BINDING PROTEIN-RELATED |
| PMEG.utg000041l.22 | ACTIN BUNDLING/MISSING IN METASTASIS-RELATED |
| PMEG.utg000041l.3 | COILED-COIL DOMAIN-CONTAINING PROTEIN 102A |
| PMEG.utg000041l.4 | |
| PMEG.utg000041l.5 | DENDRITIC CELL-SPECIFIC TRANSMEMBRANE PROTEIN |
| PMEG.utg000041l.6 | DENDRITIC CELL-SPECIFIC TRANSMEMBRANE PROTEIN |
| PMEG.utg000041l.7 | TRANSIENT RECEPTOR POTENTIAL CHANNEL |
| PMEG.utg000041l.8 | PERFORIN-LIKE PROTEIN 1 |
| PMEG.utg000041l.9 | CLEFT LIP AND PALATE ASSOCIATED TRANSMEMBRANE PROTEIN-RELATED |
| PMEG.utg000042l.1 | |
| PMEG.utg000043l.10 | PROTEIN CBG18333 |
| PMEG.utg000043l.11 | SOLUTE CARRIER FAMILY 25 |
| PMEG.utg000043l.12 | BETA-MANNOSIDASE |
| PMEG.utg000043l.13 | NUCLEOLAR GTP-BINDING PROTEIN 1 |
| PMEG.utg000043l.14 | CDK5 REGULATORY SUBUNIT-ASSOCIATED PROTEIN 3 |
| PMEG.utg000043l.15 | MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED |
| PMEG.utg000043l.16 | UNCHARACTERIZED |
| PMEG.utg000043l.17 | UNCHARACTERIZED |
| PMEG.utg000043l.18 | MAJOR FACILITATOR SUPERFAMILY PROTEIN-RELATED |
| PMEG.utg000043l.19 | |
| PMEG.utg000043l.2 | CARBOHYDRATE SULFOTRANSFERASE 15 |
| PMEG.utg000043l.20 | THIOESTERASE |
| PMEG.utg000043l.21 | |
| PMEG.utg000043l.22 |
