Synaphobranchus kaupii, also known as Kaup's arrowtooth eel, is an eel in the family Synaphobranchidae. It is a marine, deep water-dwelling eel which is known from the Indo-Western Pacific and eastern and western Atlantic Ocean. It dwells at a depth range of 120 to 4,800 metres, and inhabits the upper abyssal zone on the continental slope.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Synaphobranchus kaupii | Chordata | Kaup's arrowtooth eel | Deep sea | 967 | Southwest of Taiwan (22°17.466N 119°59.652 E) | 118154 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| SKAU_1.1 | 1.5Gb | Chromosome | 2023 | JAINUF01 | GenoFish - INRAE (Fish Physiology and Genomics laboratory) | PRJNA743503 | 97.90% | 43,073 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Genome structures resolve the early diversification of teleost fishes | Science | 36758078 |
| Gene ID | Description |
|---|---|
| SKAU_T00017510 | - |
| SKAU_T00017520 | DEHYDROGENASES, SHORT CHAIN |
| SKAU_T00017530 | RABCONNECTIN-RELATED |
| SKAU_T00017540 | SEMAPHORIN |
| SKAU_T00017550 | |
| SKAU_T00017560 | COMM DOMAIN CONTAINING PROTEIN 10 |
| SKAU_T00017570 | ADAPTOR COMPLEXES SMALL SUBUNIT FAMILY |
| SKAU_T00017580 | CYSTEINE DIOXYGENASE |
| SKAU_T00017590 | TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN |
| SKAU_T00017600 | ANKYRIN REPEAT CONTAINING |
| SKAU_T00017610 | |
| SKAU_T00017620 | |
| SKAU_T00017630 | MUTATED IN BLADDER CANCER 1 |
| SKAU_T00017640 | GERANYLGERANYL TRANSFERASE TYPE BETA SUBUNIT |
| SKAU_T00017650 | BONUS, ISOFORM C-RELATED |
| SKAU_T00017660 | E3 UBIQUITIN-PROTEIN LIGASE TRIM36-RELATED |
| SKAU_T00017670 | UNCHARACTERIZED |
| SKAU_T00017680 | |
| SKAU_T00017690 | |
| SKAU_T00017700 | |
| SKAU_T00017710 | |
| SKAU_T00017720 | |
| SKAU_T00017730 | |
| SKAU_T00017740 | |
| SKAU_T00017750 | |
| SKAU_T00017760 | |
| SKAU_T00017770 | - |
| SKAU_T00017780 | |
| SKAU_T00017790 | |
| SKAU_T00017800 | |
| SKAU_T00017810 | |
| SKAU_T00017820 | |
| SKAU_T00017830 | IONOTROPIC GLUTAMATE RECEPTOR |
| SKAU_T00017840 | |
| SKAU_T00017850 | BASIC HELIX-LOOP-HELIX PROTEIN NEUROGENIN-RELATED |
| SKAU_T00017860 | |
| SKAU_T00017870 | SNF2/RAD54 HELICASE FAMILY |
| SKAU_T00017880 | GLUTATHIONE S-TRANSFERASE |
| SKAU_T00017890 | PERFORIN-1 |
| SKAU_T00017900 | ADP-RIBOSYLATION FACTOR-LIKE PROTEIN 13B |
| SKAU_T00017910 | PERFORIN-1 |
| SKAU_T00017920 | MACROPHAGE-EXPRESSED GENE 1 PROTEIN |
| SKAU_T00017930 | SI:CH211-196P9.1-RELATED |
| SKAU_T00017940 | SI:CH211-196P9.1-RELATED |
| SKAU_T00017950 | TETRASPANIN |
| SKAU_T00017960 | MITOGEN-ACTIVATED PROTEIN KINASE |
| SKAU_T00017970 | MALIC ENZYME-RELATED |
| SKAU_T00017980 | ZINC PHOSPHODIESTERASE ELAC PROTEIN 1 |
| SKAU_T00017990 | SMAD |
| SKAU_T00018000 | RING FINGER AND KH DOMAIN CONTAINING PROTEIN 1 |
