Synaphobranchus kaupii, also known as Kaup's arrowtooth eel, is an eel in the family Synaphobranchidae. It is a marine, deep water-dwelling eel which is known from the Indo-Western Pacific and eastern and western Atlantic Ocean. It dwells at a depth range of 120 to 4,800 metres, and inhabits the upper abyssal zone on the continental slope.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Synaphobranchus kaupii | Chordata | Kaup's arrowtooth eel | Deep sea | 967 | Southwest of Taiwan (22°17.466N 119°59.652 E) | 118154 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| SKAU_1.1 | 1.5Gb | Chromosome | 2023 | JAINUF01 | GenoFish - INRAE (Fish Physiology and Genomics laboratory) | PRJNA743503 | 97.90% | 43,073 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Genome structures resolve the early diversification of teleost fishes | Science | 36758078 |
| Gene ID | Description |
|---|---|
| SKAU_T00017010 | E3 UBIQUITIN-PROTEIN LIGASE KCMF1 |
| SKAU_T00017020 | LIPASE |
| SKAU_T00017030 | MICROTUBULE-ASSOCIATED PROTEIN |
| SKAU_T00017040 | G-PROTEIN COUPLED RECEPTOR FAMILY 1 MEMBER |
| SKAU_T00017050 | |
| SKAU_T00017060 | MAP/MICROTUBULE AFFINITY-REGULATING KINASE |
| SKAU_T00017070 | 60S RIBOSOMAL PROTEIN L37 |
| SKAU_T00017080 | ALPHA-2,8-SIALYLTRANSFERASE |
| SKAU_T00017090 | PROTEIN CBG12474 |
| SKAU_T00017100 | |
| SKAU_T00017110 | PROTEIN CBG12474 |
| SKAU_T00017120 | E3 UBIQUITIN-PROTEIN LIGASE RNF165 |
| SKAU_T00017130 | |
| SKAU_T00017140 | ATP SYNTHASE SUBUNIT ALPHA, MITOCHONDRIAL |
| SKAU_T00017150 | ATP-DEPENDENT RNA AND DNA HELICASE |
| SKAU_T00017160 | LIPID PHOSPHATE PHOSPHATASE |
| SKAU_T00017170 | CHONDROITIN SYNTHASE |
| SKAU_T00017180 | SPINDLIN |
| SKAU_T00017190 | MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN 10 |
| SKAU_T00017200 | PROTEIN CBG26694 |
| SKAU_T00017210 | PIKACHURIN-LIKE PROTEIN |
| SKAU_T00017220 | LEUCINE-RICH REPEAT-CONTAINING |
| SKAU_T00017230 | PROTEIN FAM240B |
| SKAU_T00017240 | SIGNAL RECOGNITION PARTICLE 19 KD PROTEIN |
| SKAU_T00017250 | ADENOMATOUS POLYPOSIS COLI PROTEIN FAMILY |
| SKAU_T00017260 | PHOSPHATIDYLINOSITOL 3-KINASE REGULATORY SUBUNIT |
| SKAU_T00017270 | |
| SKAU_T00017280 | DISCS LARGE |
| SKAU_T00017290 | SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A-RELATED |
| SKAU_T00017300 | ATP-DEPENDENT RNA HELICASE DBP3 |
| SKAU_T00017310 | MAP KINASE KINASE KINASE SSK2-RELATED-RELATED |
| SKAU_T00017320 | UNC119-BINDING PROTEIN C5ORF30 |
| SKAU_T00017330 | NUDIX HYDROLASE, NUDC SUBFAMILY |
| SKAU_T00017340 | NUCLEAR FACTOR INTERLEUKIN-3-REGULATED PROTEIN |
| SKAU_T00017350 | CDC42 SMALL EFFECTOR PROTEIN HOMOLOG |
| SKAU_T00017360 | SOLUTE CARRIER FAMILY 12, CATION COTRANSPORTERS |
| SKAU_T00017370 | |
| SKAU_T00017380 | CORTEXIN-1-RELATED |
| SKAU_T00017390 | LAMIN DM0-RELATED |
| SKAU_T00017400 | GRAM DOMAIN-CONTAINING PROTEIN 2B-RELATED |
| SKAU_T00017410 | ZINC FINGER BED DOMAIN-CONTAINING PROTEIN 4 |
| SKAU_T00017420 | BRAKELESS PROTEIN |
| SKAU_T00017430 | UNCHARACTERIZED |
| SKAU_T00017440 | PR DOMAIN ZINC FINGER PROTEIN |
| SKAU_T00017450 | |
| SKAU_T00017460 | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE |
| SKAU_T00017470 | |
| SKAU_T00017480 | SORTING NEXIN |
| SKAU_T00017490 | SYNPHILIN-1 |
| SKAU_T00017500 | LYSYL OXIDASE-LIKE-RELATED |
