Synaphobranchus kaupii, also known as Kaup's arrowtooth eel, is an eel in the family Synaphobranchidae. It is a marine, deep water-dwelling eel which is known from the Indo-Western Pacific and eastern and western Atlantic Ocean. It dwells at a depth range of 120 to 4,800 metres, and inhabits the upper abyssal zone on the continental slope.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Synaphobranchus kaupii | Chordata | Kaup's arrowtooth eel | Deep sea | 967 | Southwest of Taiwan (22°17.466N 119°59.652 E) | 118154 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| SKAU_1.1 | 1.5Gb | Chromosome | 2023 | JAINUF01 | GenoFish - INRAE (Fish Physiology and Genomics laboratory) | PRJNA743503 | 97.90% | 43,073 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Genome structures resolve the early diversification of teleost fishes | Science | 36758078 |
| Gene ID | Description |
|---|---|
| SKAU_T00020010 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
| SKAU_T00020020 | IKB KINASE |
| SKAU_T00020030 | ENDONUCLEASE-RELATED |
| SKAU_T00020040 | PWWP DOMAIN-CONTAINING DNA REPAIR FACTOR 3 FAMILY MEMBER |
| SKAU_T00020050 | PHD-TYPE DOMAIN-CONTAINING PROTEIN |
| SKAU_T00020060 | UNCHARACTERIZED |
| SKAU_T00020070 | PROTEIN CBG26694 |
| SKAU_T00020080 | IKB KINASE |
| SKAU_T00020090 | |
| SKAU_T00020100 | |
| SKAU_T00020110 | |
| SKAU_T00020120 | |
| SKAU_T00020130 | |
| SKAU_T00020140 | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-RELATED |
| SKAU_T00020150 | TRANSPOSON TY3-I GAG-POL POLYPROTEIN |
| SKAU_T00020160 | PROTEIN CBG26694 |
| SKAU_T00020170 | FIVE-SPAN TRANSMEMBRANE PROTEIN M83 |
| SKAU_T00020180 | DNA POLYMERASE THETA, PUTATIVE (AFU_ORTHOLOGUE AFUA_1G05260)-RELATED |
| SKAU_T00020190 | |
| SKAU_T00020200 | TRANSMEMBRANE PROTEIN 127 |
| SKAU_T00020210 | WD40 PROTEIN CIAO1 |
| SKAU_T00020220 | T-SNARE COILED-COIL HOMOLOGY DOMAIN-CONTAINING PROTEIN |
| SKAU_T00020230 | |
| SKAU_T00020240 | |
| SKAU_T00020250 | |
| SKAU_T00020260 | ALPHA-2,3-SIALYLTRANSFERASE ST3GAL I ISOFORM X1 |
| SKAU_T00020270 | |
| SKAU_T00020280 | TRANSPOSABLE ELEMENT-RELATED |
| SKAU_T00020290 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
| SKAU_T00020300 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
| SKAU_T00020310 | |
| SKAU_T00020320 | |
| SKAU_T00020330 | THAP DOMAIN-CONTAINING PROTEIN 2 |
| SKAU_T00020340 | |
| SKAU_T00020350 | EXPRESSED PROTEIN |
| SKAU_T00020360 | RIBOSOMAL PROTEIN L19 |
| SKAU_T00020370 | |
| SKAU_T00020380 | PHD-TYPE DOMAIN-CONTAINING PROTEIN |
| SKAU_T00020390 | SNRNA-ACTIVATING PROTEIN COMPLEX SUBUNIT 4 |
| SKAU_T00020400 | EARLY ENDOSOME ANTIGEN 1 |
| SKAU_T00020410 | PROTEIN CBG26694 |
| SKAU_T00020420 | |
| SKAU_T00020430 | OLIGORIBONUCLEASE, MITOCHONDRIAL |
| SKAU_T00020440 | PROTEIN B, PUTATIVE-RELATED-RELATED |
| SKAU_T00020450 | AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 2 |
| SKAU_T00020460 | CEREBELLIN-RELATED |
| SKAU_T00020470 | |
| SKAU_T00020480 | |
| SKAU_T00020490 | POL PROTEIN |
| SKAU_T00020500 | ENDONUCLEASE-RELATED |
