About Paraescarpia echinospica

The vestimentiferan Paraescarpia echinospica is widely distributed in the cold seeps and methane seeps of the western Pacific Ocean, and relies on their endosymbiont bacteria as a source of energy and organic carbon. It's gutless and depends entirely on its endosymbiotic sulfide-oxidizing chemoautotrophic bacteria for nutrition. Its mechanisms of host–symbiont cooperation in energy production and nutrient biosynthesis and utilization have recently been documented through a study of its endosymbiont genome and metaproteome.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paraescarpia echinospicaAnnelidadeep-sea tubewormCold seep/Hydrothermal vent1100-1600Haima cold seep in the South China Sea (16°43.80′N, 110°28.50′E)2080241

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
HKBU_Pec_v11.09GbChromosome2021JAHLWY01Hong Kong University of Science and TechnologyPRJNA62561696.40%22,642

References
TitleJournalPubmed ID
Genomic Signatures Supporting the Symbiosis and Formation of Chitinous Tube in the Deep-Sea Tubeworm Paraescarpia echinospicaMolecular Biology and Evolution34255082

Gene Information

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Gene IDDescription
PE_Scaf9685_8.4AMMONIUM TRANSPORTER
PE_Scaf9685_8.5ZINC TRANSPORTER SLC39A7 HISTIDINE-RICH MEMBRANE PROTEIN KE4
PE_Scaf9685_9.0
PE_Scaf9685_9.5
PE_Scaf9685_9.6
PE_Scaf9687_0.2
PE_Scaf9689_1.5SERINE/THREONINE-PROTEIN KINASE ATM
PE_Scaf9689_1.6NUCLEOTIDE KINASE
PE_Scaf968_1.0AMILORIDE-SENSITIVE SODIUM CHANNEL-RELATED
PE_Scaf9690_11.3AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED
PE_Scaf9690_11.4SI:DKEY-97L20.6
PE_Scaf9690_12.11
PE_Scaf9690_12.7BAND 7 PROTEIN-RELATED
PE_Scaf9690_12.9UNCHARACTERIZED
PE_Scaf9690_2.1
PE_Scaf9690_3.10
PE_Scaf9690_3.11BRG-1 ASSOCIATED FACTOR 250 BAF250
PE_Scaf9690_3.2
PE_Scaf9690_3.4
PE_Scaf9690_4.0
PE_Scaf9690_4.1
PE_Scaf9690_5.16NUCLEOREDOXIN
PE_Scaf9690_5.7PEPTIDYL-PROLYL CIS-TRANS ISOMERASE
PE_Scaf9690_5.9
PE_Scaf9690_6.0
PE_Scaf9690_6.7METABOTROPIC GLUTAMATE RECEPTOR
PE_Scaf9690_7.0
PE_Scaf9690_7.4METABOTROPIC GLUTAMATE RECEPTOR
PE_Scaf9690_8.4UNCHARACTERIZED
PE_Scaf9690_8.8-
PE_Scaf9690_9.3PHOSPHATASE WITH HOMOLOGY TO TENSIN
PE_Scaf9690_9.4
PE_Scaf9692_0.1
PE_Scaf9697_0.1
PE_Scaf9697_0.11
PE_Scaf9697_0.12CASPASE
PE_Scaf9698_0.4
PE_Scaf9698_1.5
PE_Scaf9698_2.0
PE_Scaf9698_2.4BTB DOMAIN-CONTAINING PROTEIN
PE_Scaf96_0.0
PE_Scaf9700_0.5LIPOCALIN-1 INTERACTING MEMBRANE RECEPTOR LIMR
PE_Scaf9700_1.7UNCHARACTERIZED
PE_Scaf9700_1.8CYCLIN
PE_Scaf9700_1.9RAS, DI-RAS, AND RHEB FAMILY MEMBERS OF SMALL GTPASE SUPERFAMILY
PE_Scaf9700_3.10
PE_Scaf9700_3.8PIKACHURIN-LIKE PROTEIN
PE_Scaf9700_3.9
PE_Scaf9704_0.0
PE_Scaf9704_0.11
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