About Synaphobranchus kaupii

Synaphobranchus kaupii, also known as Kaup's arrowtooth eel, is an eel in the family Synaphobranchidae. It is a marine, deep water-dwelling eel which is known from the Indo-Western Pacific and eastern and western Atlantic Ocean. It dwells at a depth range of 120 to 4,800 metres, and inhabits the upper abyssal zone on the continental slope.

Classification

Animalia (Kingdom); Chordata (Phylum); Vertebrata (Subphylum); Gnathostomata (Infraphylum); Osteichthyes (Parvphylum); Actinopterygii (Gigaclass); Actinopteri (Superclass); Teleostei (Class); Anguilliformes (Order); Synaphobranchidae (Family); Synaphobranchinae (Subfamily); Synaphobranchus (Genus); Synaphobranchus kaupii (Species)

Original Name

Synaphobranchus kaupii Johnson, 1862

Original Description/Redescription

1. Yate J. 2. Descriptions of some New Genera and Species of Fishes obtained at Madeira[C]//Proceedings of the Zoological Society of London. Oxford, UK: Blackwell Publishing Ltd, 1862, 30(1): 167-180. (Johnson et al., 1862)

Partial Description

Feed on decapods, natantia, amphipods, fishes and cephalopods

Distribution/Locality

Gulf of Saint Lawrence, North Atlantic Ocean, South Africa at depths of 800- 2000 m


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Synaphobranchus kaupiiChordataKaup's arrowtooth eelDeep sea967Southwest of Taiwan (22°17.466N 119°59.652 E)118154

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
SKAU_1.11.5GbChromosome2023JAINUF01GenoFish - INRAE (Fish Physiology and Genomics laboratory)PRJNA74350397.90 76,800/519.842.5-43,073

References
TitleJournalPubmed ID
Genome structures resolve the early diversification of teleost fishesScience36758078

Gene Information

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Gene IDDescription
SKAU_T00296010PHD/F-BOX CONTAINING PROTEIN
SKAU_T00296020UBIQUITIN-CONJUGATING ENZYME E2
SKAU_T00296030IMPORTIN BETA
SKAU_T00296040PHOSPHATIDYLINOSITOL 3-KINASE REGULATORY SUBUNIT
SKAU_T00296050RING FINGER DOMAIN-CONTAINING, POLYCOMB GROUP COMPONENT
SKAU_T00296060CENTROSOMAL PROTEIN OF 112 KDA
SKAU_T00296070FORKHEAD BOX PROTEIN O
SKAU_T00296080MITOCHONDRIAL RIBOSOMAL PROTEIN S31
SKAU_T00296090MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED
SKAU_T00296100MANNOSE-P-DOLICHOL UTILIZATION DEFECT 1 LEC35 -RELATED
SKAU_T00296110SOX TRANSCRIPTION FACTOR
SKAU_T00296120
SKAU_T00296130NACHT, LRR AND CARD DOMAINS-CONTAINING
SKAU_T00296140NACHT, LRR AND CARD DOMAINS-CONTAINING
SKAU_T00296150DED DOMAIN-CONTAINING PROTEIN
SKAU_T00296160TEX2 PROTEIN-RELATED
SKAU_T00296170TEX2 PROTEIN-RELATED
SKAU_T00296180
SKAU_T00296190AXIN
SKAU_T00296200CENTROSOMAL PROTEIN OF 112 KDA
SKAU_T00296210GRANULIN
SKAU_T00296220EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA
SKAU_T00296230EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA
SKAU_T00296240GRANULIN
SKAU_T00296250EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA
SKAU_T00296260GRANULIN
SKAU_T00296270GRANULIN
SKAU_T00296280SUSHI DOMAIN-CONTAINING PROTEIN
SKAU_T00296290INTEGRIN ALPHA
SKAU_T00296300AQUAPORIN TRANSPORTER
SKAU_T00296310
SKAU_T00296320NINJURIN-RELATED
SKAU_T00296330PDF RECEPTOR-LIKE PROTEIN-RELATED
SKAU_T00296340
SKAU_T00296350CELL DIVISION CYCLE 16,23,27
SKAU_T00296360NON-SPECIFIC LETHAL 1, ISOFORM M
SKAU_T00296370MICROTUBULE-ASSOCIATED PROTEIN
SKAU_T00296380
SKAU_T00296390
SKAU_T00296400MYOSIN LIGHT CHAIN 1, 3
SKAU_T00296410VOLTAGE-GATED CATION CHANNEL CALCIUM AND SODIUM
SKAU_T00296420
SKAU_T00296430VOLTAGE-GATED CATION CHANNEL CALCIUM AND SODIUM
SKAU_T00296440
SKAU_T00296450VOLTAGE-GATED CATION CHANNEL CALCIUM AND SODIUM
SKAU_T00296460SOMATOTROPIN,PROLACTIN
SKAU_T00296470RAD52 MOTIF-CONTAINING PROTEIN 1
SKAU_T00296480TYPE I INTERFERON
SKAU_T00296490TYPE I INTERFERON
SKAU_T00296500TYPE I INTERFERON
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