About Synaphobranchus kaupii

Synaphobranchus kaupii, also known as Kaup's arrowtooth eel, is an eel in the family Synaphobranchidae. It is a marine, deep water-dwelling eel which is known from the Indo-Western Pacific and eastern and western Atlantic Ocean. It dwells at a depth range of 120 to 4,800 metres, and inhabits the upper abyssal zone on the continental slope.

Classification

Animalia (Kingdom); Chordata (Phylum); Vertebrata (Subphylum); Gnathostomata (Infraphylum); Osteichthyes (Parvphylum); Actinopterygii (Gigaclass); Actinopteri (Superclass); Teleostei (Class); Anguilliformes (Order); Synaphobranchidae (Family); Synaphobranchinae (Subfamily); Synaphobranchus (Genus); Synaphobranchus kaupii (Species)

Original Name

Synaphobranchus kaupii Johnson, 1862

Original Description/Redescription

1. Yate J. 2. Descriptions of some New Genera and Species of Fishes obtained at Madeira[C]//Proceedings of the Zoological Society of London. Oxford, UK: Blackwell Publishing Ltd, 1862, 30(1): 167-180. (Johnson et al., 1862)

Partial Description

Feed on decapods, natantia, amphipods, fishes and cephalopods

Distribution/Locality

Gulf of Saint Lawrence, North Atlantic Ocean, South Africa at depths of 800- 2000 m


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Synaphobranchus kaupiiChordataKaup's arrowtooth eelDeep sea967Southwest of Taiwan (22°17.466N 119°59.652 E)118154

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
SKAU_1.11.5GbChromosome2023JAINUF01GenoFish - INRAE (Fish Physiology and Genomics laboratory)PRJNA74350397.90 76,800/519.842.5-43,073

References
TitleJournalPubmed ID
Genome structures resolve the early diversification of teleost fishesScience36758078

Gene Information

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Gene IDDescription
SKAU_T00307010EGF-LIKE DOMAIN-CONTAINING PROTEIN
SKAU_T00307020
SKAU_T00307030SARCOSINE DEHYDROGENASE-RELATED
SKAU_T00307040SELECTIN LIGAND RELATED
SKAU_T00307050RFWD3 PROTEIN
SKAU_T00307060SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED
SKAU_T00307070GATOR COMPLEX PROTEIN WDR59
SKAU_T00307080RNA-BINDING PROTEIN NOB1
SKAU_T00307090CONSERVED OLIGOMERIC GOLGI COMPLEX COMPONENT 8
SKAU_T00307100CYCLIN-DEPENDENT KINASES REGULATORY SUBUNIT/60S RIBOSOME SUBUNIT BIOGENESIS PROTEIN NIP7
SKAU_T00307110TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN
SKAU_T00307120ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN
SKAU_T00307130HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN
SKAU_T00307140URICASE AND TRANSTHYRETIN-RELATED
SKAU_T00307150PROGRAMMED CELL DEATH PROTEIN 5
SKAU_T00307160DIPHOSPHOMEVALONATE DECARBOXYLASE
SKAU_T00307170CYTOCHROME B-245 LIGHT CHAIN
SKAU_T00307180NULP1-RELATED
SKAU_T00307190G-PROTEIN COUPLED RECEPTOR
SKAU_T00307200REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
SKAU_T00307210TUBULIN
SKAU_T00307220PLECKSTRIN HOMOLOGY DOMAIN CONTAINING PROTEIN
SKAU_T00307230ATP-DEPENDENT PROTEASE
SKAU_T00307240DYSTROBREVIN BINDING PROTEIN 1 DYSBINDIN
SKAU_T00307250DYNEIN REGULATORY COMPLEX SUBUNIT 4
SKAU_T00307260PROTEIN CBG26694
SKAU_T00307270CARBOXYLESTERASE
SKAU_T003072805-FORMYLTETRAHYDROFOLATE CYCLO-LIGASE-RELATED
SKAU_T00307290FORKHEAD BOX PROTEIN BINIOU
SKAU_T00307300
SKAU_T00307310
SKAU_T00307320
SKAU_T00307330
SKAU_T00307340TRANSCRIPTION INTERMEDIARY FACTOR
SKAU_T00307350RAS-LIKE FAMILY MEMBER 11
SKAU_T00307360LD11652P
SKAU_T00307370TUBBY-RELATED
SKAU_T00307380LY6/PLAUR DOMAIN-CONTAINING PROTEIN 8
SKAU_T00307390RAS, DI-RAS, AND RHEB FAMILY MEMBERS OF SMALL GTPASE SUPERFAMILY
SKAU_T00307400COATOMER SUBUNIT BETA
SKAU_T00307410
SKAU_T00307420PROTEASOME SUBUNIT ALPHA/BETA
SKAU_T00307430CYCLIC NUCLEOTIDE PHOSPHODIESTERASE
SKAU_T00307440CALCITONIN-RELATED
SKAU_T00307450
SKAU_T00307460INSCUTEABLE
SKAU_T00307470
SKAU_T00307480
SKAU_T00307490
SKAU_T00307500PHOSPHOINOSITOL 3-PHOSPHATE-BINDING PROTEIN
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