About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_035072-T1EXS-RELATED PROTEIN
LLU|FUN_035073-T1
LLU|FUN_035074-T1
LLU|FUN_035075-T1
LLU|FUN_035076-T1
LLU|FUN_035077-T1
LLU|FUN_035078-T1LORICRIN
LLU|FUN_035079-T1
LLU|FUN_035080-T1BCL-2 RELATED
LLU|FUN_035081-T1
LLU|FUN_035082-T1
LLU|FUN_035083-T1
LLU|FUN_035084-T1CONSERVED OLIGOMERIC GOLGI COMPLEX SUBUNIT 1
LLU|FUN_035085-T1ZINC FINGER BED DOMAIN-CONTAINING PROTEIN 4
LLU|FUN_035086-T1
LLU|FUN_035087-T1CONSERVED OLIGOMERIC GOLGI COMPLEX SUBUNIT 1
LLU|FUN_035088-T1RING FINGER AND KH DOMAIN CONTAINING PROTEIN 1
LLU|FUN_035089-T1
LLU|FUN_035090-T1PROTEIN CBG11839-RELATED
LLU|FUN_035091-T1
LLU|FUN_035092-T1METHYL-CPG BINDING PROTEIN, MBD
LLU|FUN_035093-T1
LLU|FUN_035094-T1
LLU|FUN_035095-T1ANKYRIN REPEAT CONTAINING
LLU|FUN_035096-T1
LLU|FUN_035097-T126S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 11/COP9 SIGNALOSOME COMPLEX SUBUNIT 2
LLU|FUN_035098-T1DET1- AND DDB1-ASSOCIATED PROTEIN 1
LLU|FUN_035099-T1TPR REPEAT CONTAINING PROTEIN
LLU|FUN_035100-T1PHOSPHOMEVALONATE KINASE
LLU|FUN_035101-T1DNA-DIRECTED RNA POLYMERASE III
LLU|FUN_035102-T1
LLU|FUN_035103-T1
LLU|FUN_035104-T1DUAL OXIDASE 2
LLU|FUN_035105-T1
LLU|FUN_035106-T1OXIDASE/PEROXIDASE
LLU|FUN_035107-T1
LLU|FUN_035108-T1MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM44
LLU|FUN_035109-T1MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM44
LLU|FUN_035110-T1HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED
LLU|FUN_035111-T1EG:EG0003.4 PROTEIN-RELATED
LLU|FUN_035112-T1EG:EG0003.4 PROTEIN-RELATED
LLU|FUN_035113-T1
LLU|FUN_035114-T1
LLU|FUN_035115-T1
LLU|FUN_035116-T1
LLU|FUN_035117-T1
LLU|FUN_035118-T1
LLU|FUN_035119-T1ARRESTIN DOMAIN CONTAINING PROTEIN
LLU|FUN_035120-T1LEUCINE-RICH REPEAT-CONTAINING
LLU|FUN_035121-T1
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