About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_035224-T1
LLU|FUN_035225-T1
LLU|FUN_035226-T1CILIA- AND FLAGELLA-ASSOCIATED PROTEIN 54
LLU|FUN_035227-T1
LLU|FUN_035228-T1
LLU|FUN_035229-T1
LLU|FUN_035230-T1
LLU|FUN_035231-T1
LLU|FUN_035232-T1
LLU|FUN_035233-T1
LLU|FUN_035234-T1
LLU|FUN_035235-T1
LLU|FUN_035236-T1
LLU|FUN_035237-T1
LLU|FUN_035238-T1
LLU|FUN_035239-T1SLD5 PROTEIN
LLU|FUN_035240-T1MYOTROPHIN
LLU|FUN_035241-T1MOLTING PROTEIN MLT-4
LLU|FUN_035242-T1
LLU|FUN_035243-T1
LLU|FUN_035244-T1
LLU|FUN_035245-T1SI:CH211-266K2.1
LLU|FUN_035246-T1
LLU|FUN_035247-T1
LLU|FUN_035248-T1
LLU|FUN_035249-T1
LLU|FUN_035250-T1TENEURIN AND N-ACETYLGLUCOSAMINE-1-PHOSPHODIESTER ALPHA-N-ACETYLGLUCOSAMINIDASE
LLU|FUN_035251-T1
LLU|FUN_035252-T1
LLU|FUN_035253-T1
LLU|FUN_035254-T1
LLU|FUN_035255-T1
LLU|FUN_035256-T1EF-HAND CALCIUM-BINDING DOMAIN-CONTAINING PROTEIN 6-RELATED
LLU|FUN_035257-T1TESTIS-EXPRESSED PROTEIN 15
LLU|FUN_035258-T1SERINE/THREONINE-PROTEIN KINASE NEK
LLU|FUN_035259-T1BIFUNCTIONAL 3'-PHOSPHOADENOSINE 5'-PHOSPHOSULFATE SYNTHASE
LLU|FUN_035260-T1
LLU|FUN_035261-T1
LLU|FUN_035262-T1MULTIPLE INOSITOL POLYPHOSPHATE PHOSPHATASE-RELATED
LLU|FUN_035263-T1IKB KINASE
LLU|FUN_035264-T1IKB KINASE
LLU|FUN_035265-T1
LLU|FUN_035266-T1EUKARYOTIC TRANSLATION INITIATION FACTOR 2C
LLU|FUN_035267-T1GUANYLATE CYCLASE SOLUBLE SUBUNIT BETA-2
LLU|FUN_035268-T1
LLU|FUN_035269-T1
LLU|FUN_035270-T1
LLU|FUN_035271-T1
LLU|FUN_035272-T1
LLU|FUN_035273-T1
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