About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_035122-T1
LLU|FUN_035123-T1
LLU|FUN_035124-T1
LLU|FUN_035125-T1
LLU|FUN_035126-T1GAMMA TUBULIN COMPLEX PROTEIN
LLU|FUN_035127-T1
LLU|FUN_035128-T1
LLU|FUN_035129-T1
LLU|FUN_035130-T1
LLU|FUN_035131-T1
LLU|FUN_035132-T1
LLU|FUN_035133-T1KELCH REPEAT DOMAIN
LLU|FUN_035134-T1ADAM10/ADAM17 METALLOPEPTIDASE FAMILY MEMBER
LLU|FUN_035135-T1SPLICING FACTOR SF3A-RELATED
LLU|FUN_035136-T1LEUCINE-RICH REPEAT, ISOFORM F-RELATED
LLU|FUN_035137-T1CASEIN KINASE-RELATED
LLU|FUN_035138-T1TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 6B
LLU|FUN_035139-T1PINN
LLU|FUN_035140-T1
LLU|FUN_035141-T1UPF0692 PROTEIN C19ORF54
LLU|FUN_035142-T1ARMADILLO-TYPE FOLD-RELATED
LLU|FUN_035143-T1
LLU|FUN_035144-T1PROTEASE FAMILY M14 CARBOXYPEPTIDASE A,B
LLU|FUN_035145-T1TRNA (ADENINE(58)-N(1))-METHYLTRANSFERASE
LLU|FUN_035146-T1SEEDY PROTEIN A/C FAMILY MEMBER
LLU|FUN_035147-T1RING ZINC FINGER PROTEIN
LLU|FUN_035148-T1
LLU|FUN_035149-T1STERILE ALPHA MOTIF DOMAIN CONTAINING PROTEIN 4-RELATED
LLU|FUN_035150-T1STERILE ALPHA MOTIF DOMAIN CONTAINING PROTEIN 4-RELATED
LLU|FUN_035151-T1
LLU|FUN_035152-T1
LLU|FUN_035153-T1
LLU|FUN_035154-T1
LLU|FUN_035155-T1
LLU|FUN_035156-T1
LLU|FUN_035157-T1CALCIUM-ACTIVATED CHLORIDE CHANNEL REGULATOR
LLU|FUN_035158-T1GLUTAMINE SYNTHETASE
LLU|FUN_035159-T1GLUTAMINE SYNTHETASE
LLU|FUN_035160-T1
LLU|FUN_035161-T1
LLU|FUN_035162-T1GLUTAMINE SYNTHETASE
LLU|FUN_035163-T1
LLU|FUN_035164-T1
LLU|FUN_035165-T1
LLU|FUN_035166-T1
LLU|FUN_035167-T1
LLU|FUN_035168-T1
LLU|FUN_035169-T1
LLU|FUN_035170-T1
LLU|FUN_035171-T1
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