About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_038258-T1FATTY ACID SYNTHASE
LLU|FUN_038259-T1
LLU|FUN_038260-T1
LLU|FUN_038261-T1TRICHOHYALIN-RELATED
LLU|FUN_038262-T1CARTILAGE INTERMEDIATE LAYER PROTEIN CLIP
LLU|FUN_038263-T1
LLU|FUN_038264-T1
LLU|FUN_038265-T1
LLU|FUN_038266-T1
LLU|FUN_038267-T1SMC5-SMC6 COMPLEX LOCALIZATION FACTOR 2
LLU|FUN_038268-T1
LLU|FUN_038269-T1METAL TRANSPORTER CNNM
LLU|FUN_038270-T1
LLU|FUN_038271-T1UNCHARACTERIZED
LLU|FUN_038272-T1BIORIENTATION OF CHROMOSOMES IN CELL DIVISION 1 LIKE 1
LLU|FUN_038273-T1TENASCIN
LLU|FUN_038274-T1
LLU|FUN_038275-T1ACTIN
LLU|FUN_038276-T1SUPPRESSOR OF FUSED
LLU|FUN_038277-T1UNCHARACTERIZED
LLU|FUN_038278-T1LIN-24 (TWENTY-FOUR) LIKE
LLU|FUN_038279-T1LIN-24 (TWENTY-FOUR) LIKE
LLU|FUN_038280-T1
LLU|FUN_038281-T1CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT
LLU|FUN_038282-T1VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 37
LLU|FUN_038283-T160S/50S RIBOSOMAL PROTEIN L6/L9
LLU|FUN_038284-T1
LLU|FUN_038285-T1SYNAPTIC ADHESION-LIKE MOLECULE SALM
LLU|FUN_038286-T1
LLU|FUN_038287-T1GOLGI MEMBRANE PROTEIN YIP1
LLU|FUN_038288-T1GOLGI MEMBRANE PROTEIN YIP1
LLU|FUN_038289-T1
LLU|FUN_038290-T1UNCHARACTERIZED
LLU|FUN_038291-T1TOLL-LIKE RECEPTOR
LLU|FUN_038292-T1
LLU|FUN_038293-T1TOLL-LIKE RECEPTOR
LLU|FUN_038294-T1TOLL-LIKE RECEPTOR
LLU|FUN_038295-T1
LLU|FUN_038296-T1
LLU|FUN_038297-T1PHOSPHORIBOSYLFORMYLGLYCINAMIDINE SYNTHASE
LLU|FUN_038298-T1ZGC:195170
LLU|FUN_038299-T1PHOSPHATIDYLETHANOLAMINE-BINDING PROTEIN
LLU|FUN_038300-T1THYROTROPH EMBRYONIC FACTOR RELATED
LLU|FUN_038301-T1
LLU|FUN_038302-T1EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN
LLU|FUN_038303-T1
LLU|FUN_038304-T1ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
LLU|FUN_038305-T1SERINE/THREONINE-PROTEIN PHOSPHATASE 5-RELATED
LLU|FUN_038306-T1
LLU|FUN_038307-T1ASPARTYL/LYSYL-TRNA SYNTHETASE
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