About Riftia pachyptila

Riftia pachyptila, commonly known as the giant tube worm, is a marine invertebrate in the phylum Annelida. It inhabits hydrothermal vent ecosystems on the Pacific Ocean floor, where temperatures range from 2 to 30 °C. This species can tolerate extremely high hydrogen sulfide levels and relies entirely on symbiotic sulfur-oxidizing bacteria housed in its trophosome for nutrition. These worms can grow up to 3 meters in length, with tubular bodies reaching a diameter of 4 cm, making them one of the most iconic organisms in deep-sea vent ecosystems.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Riftia pachyptilaAnnelidaCold seep, Deep sea, Vent field2,514 hydrothermal vent site Tica, East Pacific Rise (Alvin dive 4839, 9°50.398′N, 104°17.506′W)6426

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
-554MbContig2023-QUEEN MARY UNIVERSITY OF LONDONPRJEB5504796%37,037

References
TitleJournalPubmed ID
Distinct genomic routes underlie transitions to specialised symbiotic lifestyles in deep-sea annelid wormsnature communications37198188

Gene Information

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Gene IDDescription
RPACG04380.1RIKEN CDNA 4921504E06 GENE
RPACG04381.1FIBRONECTIN TYPE-III DOMAIN-CONTAINING PROTEIN-RELATED
RPACG04382.1FIBRONECTIN TYPE-III DOMAIN-CONTAINING PROTEIN-RELATED
RPACG04383.1
RPACG04384.1
RPACG04385.1
RPACG04386.1FIBRONECTIN TYPE-III DOMAIN-CONTAINING PROTEIN-RELATED
RPACG04387.1
RPACG04388.1
RPACG04389.1
RPACG04390.1
RPACG04390.2
RPACG04391.1
RPACG04392.1
RPACG04393.1
RPACG04394.1FIBRONECTIN TYPE-III DOMAIN-CONTAINING PROTEIN-RELATED
RPACG04395.1
RPACG04396.1
RPACG04397.1
RPACG04398.1
RPACG04399.1
RPACG04400.1
RPACG04401.1
RPACG04402.1
RPACG04403.1
RPACG04404.1
RPACG04405.1
RPACG04405.2
RPACG04405.3
RPACG04405.4
RPACG04406.1
RPACG04407.1
RPACG04408.1
RPACG04409.1
RPACG04410.1
RPACG04410.2
RPACG04411.1
RPACG04412.1FIBRONECTIN TYPE-III DOMAIN-CONTAINING PROTEIN-RELATED
RPACG04413.1
RPACG04414.1
RPACG04415.1
RPACG04416.1FIBRONECTIN TYPE-III DOMAIN-CONTAINING PROTEIN-RELATED
RPACG04416.2
RPACG04417.1
RPACG04418.1
RPACG04419.1
RPACG04420.1
RPACG04421.1
RPACG04422.1FIBRONECTIN TYPE-III DOMAIN-CONTAINING PROTEIN-RELATED
RPACG04423.1
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