The Atlantic deep-sea scallop Placopecten magellanicus is a species in the family Pectinidae. And they are a commercially important pectinid bivalve mollusk native to the northwest Atlantic Ocean. In addition, they are found on the continental shelf of the northwest Atlantic from the north shore of the Gulf of St. Lawrence south to Cape Hatteras, North Carolina.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Placopecten magellanicus | Mollusca | deep-sea scallop | Hydrothermal vent | 0-384 | Dalian in the Liaoning Province of China (38.43 N 120.91 E) | 6577 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 1.83Gb | Chromosome | 2023 | - | Dalian Key Laboratory of Genetic Resources for Marine Shellfish, Liaoning Ocean and Fisheries Science Research Institute | PRJNA923123 | 94.10% | 28,111 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Chromosome-level genome assembly of sea scallop Placopecten magellanicus provides insights into the genetic characteristics and adaptive evolution of large scallops | Genomics | 37977331 |
| Gene ID | Description |
|---|---|
| PMEG.utg000119l.49 | SELENOPROTEIN S |
| PMEG.utg000119l.5 | |
| PMEG.utg000119l.6 | SI:CH211-266K2.1 |
| PMEG.utg000119l.7 | TRANSMEMBRANE PROTEIN 192 |
| PMEG.utg000119l.8 | PHOSPHOLIPID SCRAMBLASE-RELATED |
| PMEG.utg000119l.9 | MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 7-RELATED |
| PMEG.utg000121l.1 | METHIONYL-TRNA SYNTHETASE |
| PMEG.utg000121l.10 | GAMMA-BUTYROBETAINE HYDROXYLASE-RELATED |
| PMEG.utg000121l.11 | HOMEOBOX PROTEIN ARISTALESS |
| PMEG.utg000121l.12 | TUMOR NECROSIS FACTOR FAMILY MEMBER |
| PMEG.utg000121l.13 | SODIUM/HYDROGEN EXCHANGER |
| PMEG.utg000121l.14 | LIPOPOLYSACCHARIDE-INDUCED TUMOR NECROSIS FACTOR-ALPHA FACTOR |
| PMEG.utg000121l.15 | DNA2/NAM7 HELICASE FAMILY |
| PMEG.utg000121l.16 | ZINC FINGER PROTEIN |
| PMEG.utg000121l.17 | |
| PMEG.utg000121l.18 | MONOCARBOXYLATE TRANSPORTER |
| PMEG.utg000121l.19 | MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED |
| PMEG.utg000121l.2 | CYTOKINESIS PROTEIN 3 |
| PMEG.utg000121l.20 | NAD(P)-BINDING ROSSMANN-FOLD SUPERFAMILY PROTEIN-RELATED |
| PMEG.utg000121l.21 | C13ORF1 PROTEIN-RELATED |
| PMEG.utg000121l.22 | MONOCARBOXYLATE TRANSPORTER |
| PMEG.utg000121l.23 | PROPIONYL-COA CARBOXYLASE BETA CHAIN |
| PMEG.utg000121l.24 | GLYCOSYLTRANSFERASE |
| PMEG.utg000121l.25 | VWFC DOMAIN-CONTAINING PROTEIN |
| PMEG.utg000121l.26 | |
| PMEG.utg000121l.27 | CAMK FAMILY PROTEIN KINASE |
| PMEG.utg000121l.28 | 1-AMINOCYCLOPROPANE-1-CARBOXYLATE DEAMINASE-RELATED |
| PMEG.utg000121l.29 | MANNOSE-P-DOLICHOL UTILIZATION DEFECT 1 LEC35 -RELATED |
| PMEG.utg000121l.30 | 3-OXOACYL-(ACYL-CARRIER-PROTEIN) REDUCTASE |
| PMEG.utg000121l.31 | RHO FAMILY GTPASE |
| PMEG.utg000121l.32 | NEUROLIGIN |
| PMEG.utg000121l.4 | LD41958P |
| PMEG.utg000121l.5 | SODIUM-COUPLED MONOCARBOXYLATE TRANSPORTER |
| PMEG.utg000121l.6 | METAXIN RELATED |
| PMEG.utg000121l.7 | MISSHAPEN LIKE KINASE 1 |
| PMEG.utg000121l.8 | |
| PMEG.utg000121l.9 | SODIUM/HYDROGEN EXCHANGER |
| PMEG.utg000122l.1 | PROTEIN HAPLESS 2 |
| PMEG.utg000122l.10 | RIBOSOMAL PROTEIN S6 KINASE |
| PMEG.utg000122l.11 | F-BOX ONLY PROTEIN 28 |
| PMEG.utg000122l.12 | BTB/POZ DOMAIN-CONTAINING |
| PMEG.utg000122l.13 | BLR2807 PROTEIN |
| PMEG.utg000122l.14 | ZGC:174356 |
| PMEG.utg000122l.15 | ZGC:174356 |
| PMEG.utg000122l.16 | ZGC:174356 |
| PMEG.utg000122l.2 | MEMBRANE-ASSOCIATED PROGESTERONE RECEPTOR COMPONENT-RELATED |
| PMEG.utg000122l.3 | ACTIN |
| PMEG.utg000122l.4 | EUKARYOTIC TRANSLATION INITIATION FACTOR |
| PMEG.utg000122l.5 | KINESIN LIGHT CHAIN |
| PMEG.utg000122l.6 | SYNDROMES PUTATIVE CHAPERONIN-RELATED |
