The Atlantic deep-sea scallop Placopecten magellanicus is a species in the family Pectinidae. And they are a commercially important pectinid bivalve mollusk native to the northwest Atlantic Ocean. In addition, they are found on the continental shelf of the northwest Atlantic from the north shore of the Gulf of St. Lawrence south to Cape Hatteras, North Carolina.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Placopecten magellanicus | Mollusca | deep-sea scallop | Hydrothermal vent | 0-384 | Dalian in the Liaoning Province of China (38.43 N 120.91 E) | 6577 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 1.83Gb | Chromosome | 2023 | - | Dalian Key Laboratory of Genetic Resources for Marine Shellfish, Liaoning Ocean and Fisheries Science Research Institute | PRJNA923123 | 94.10% | 28,111 |
Title | Journal | Pubmed ID |
---|---|---|
Chromosome-level genome assembly of sea scallop Placopecten magellanicus provides insights into the genetic characteristics and adaptive evolution of large scallops | Genomics | 37977331 |
Gene ID | Description |
---|---|
PMEG.utg000115l.45 | GAMMA GLUTAMYL TRANSPEPTIDASE |
PMEG.utg000115l.46 | VERTNIN |
PMEG.utg000115l.47 | SUCCINATE DEHYDROGENASE CYTOCHROME B560 SUBUNIT |
PMEG.utg000115l.48 | O-METHYLTRANSFERASE-RELATED |
PMEG.utg000115l.49 | COILED-COIL DOMAIN-CONTAINING PROTEIN 153 |
PMEG.utg000115l.5 | UBIQUITIN-FOLD MODIFIER-CONJUGATING ENZYME 1 |
PMEG.utg000115l.50 | NF-KAPPA-B INHIBITOR ALPHA |
PMEG.utg000115l.51 | NEPHRIN |
PMEG.utg000115l.52 | F5/8 TYPE C DOMAIN-CONTAINING PROTEIN-RELATED |
PMEG.utg000115l.53 | NEPHRIN |
PMEG.utg000115l.55 | E3 UBIQUITIN-PROTEIN LIGASE TTC3 |
PMEG.utg000115l.56 | RETINOBLASTOMA-BINDING PROTEIN 5 |
PMEG.utg000115l.57 | CYTOCHROME P450 FAMILY 4 |
PMEG.utg000115l.58 | S-ADENOSYL-L-METHIONINE:CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN |
PMEG.utg000115l.59 | |
PMEG.utg000115l.6 | EPIDIDYMAL MEMBRANE PROTEIN E9-RELATED |
PMEG.utg000115l.60 | GLYCOSYLTRANSFERASE 14 FAMILY MEMBER |
PMEG.utg000115l.61 | |
PMEG.utg000115l.63 | TRNA SELENOCYSTEINE 1-ASSOCIATED PROTEIN 1-RELATED-RELATED |
PMEG.utg000115l.64 | RNA BINDING MOTIF RBM PROTEIN -RELATED |
PMEG.utg000115l.65 | LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED |
PMEG.utg000115l.66 | UNCHARACTERIZED |
PMEG.utg000115l.67 | IG-LIKE DOMAIN-CONTAINING PROTEIN |
PMEG.utg000115l.68 | TRANSMEMBRANE PROTEIN 136 |
PMEG.utg000115l.69 | 40S RIBOSOMAL PROTEIN S19 |
PMEG.utg000115l.7 | SOLUTE CARRIER FAMILY 40 MEMBER |
PMEG.utg000115l.70 | VASCULAR CELL ADHESION MOLECULE 1 |
PMEG.utg000115l.71 | |
PMEG.utg000115l.72 | AMMONIUM TRANSPORTER |
PMEG.utg000115l.8 | IG-LIKE DOMAIN-CONTAINING PROTEIN |
PMEG.utg000115l.9 | ZINC FINGER HIT DOMAIN CONTAINING PROTEIN 2 PROTEIN FON -RELATED |
PMEG.utg000118l.1 | |
PMEG.utg000118l.10 | MSF1/PX19 RELATED |
PMEG.utg000118l.11 | OXIDASE/PEROXIDASE |
PMEG.utg000118l.12 | CONTACTIN 5 |
PMEG.utg000118l.13 | ACYLPYRUVASE |
PMEG.utg000118l.14 | TYROSINE-PROTEIN KINASE RECEPTOR |
PMEG.utg000118l.15 | 5'-NUCLEOTIDASE DOMAIN-CONTAINING |
PMEG.utg000118l.16 | DIHYDRODIPICOLINATE SYNTHASE |
PMEG.utg000118l.18 | CORTACTIN AND DREBRIN |
PMEG.utg000118l.19 | RHO FAMILY GTPASE |
PMEG.utg000118l.2 | |
PMEG.utg000118l.20 | ANILLIN/RHOTEKIN RTKN |
PMEG.utg000118l.21 | ATP-DEPENDENT RNA HELICASE DBP3 |
PMEG.utg000118l.22 | PROTEIN TORNADO 1 |
PMEG.utg000118l.23 | |
PMEG.utg000118l.24 | |
PMEG.utg000118l.25 | INHIBITOR OF APOPTOSIS |
PMEG.utg000118l.26 | |
PMEG.utg000118l.27 | POLYCYSTIN FAMILY MEMBER |