The Atlantic deep-sea scallop Placopecten magellanicus is a species in the family Pectinidae. And they are a commercially important pectinid bivalve mollusk native to the northwest Atlantic Ocean. In addition, they are found on the continental shelf of the northwest Atlantic from the north shore of the Gulf of St. Lawrence south to Cape Hatteras, North Carolina.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Placopecten magellanicus | Mollusca | deep-sea scallop | Hydrothermal vent | 0-384 | Dalian in the Liaoning Province of China (38.43 N 120.91 E) | 6577 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 1.83Gb | Chromosome | 2023 | - | Dalian Key Laboratory of Genetic Resources for Marine Shellfish, Liaoning Ocean and Fisheries Science Research Institute | PRJNA923123 | 94.10% | 28,111 |
Title | Journal | Pubmed ID |
---|---|---|
Chromosome-level genome assembly of sea scallop Placopecten magellanicus provides insights into the genetic characteristics and adaptive evolution of large scallops | Genomics | 37977331 |
Gene ID | Description |
---|---|
PMEG.utg000114l.10 | UNCHARACTERIZED |
PMEG.utg000114l.11 | NUCLEAR FACTOR NF-KAPPA-B PROTEIN |
PMEG.utg000114l.12 | N-ALPHA-ACETYLTRANSFERASE 30 |
PMEG.utg000114l.13 | BREAST CANCER METASTASIS-SUPPRESSOR 1 |
PMEG.utg000114l.14 | ALPHA-KETOGLUTARATE-DEPENDENT DIOXYGENASE ALKB HOMOLOG 6 |
PMEG.utg000114l.15 | DICER-RELATED |
PMEG.utg000114l.16 | RAS, DI-RAS, AND RHEB FAMILY MEMBERS OF SMALL GTPASE SUPERFAMILY |
PMEG.utg000114l.17 | CHYMOTRYPSIN-RELATED |
PMEG.utg000114l.18 | HOMEOBOX PROTEIN NKX |
PMEG.utg000114l.19 | TUBULIN POLYGLUTAMYLASE |
PMEG.utg000114l.2 | |
PMEG.utg000114l.20 | UNCHARACTERIZED |
PMEG.utg000114l.21 | VOLTAGE-GATED CATION CHANNEL CALCIUM AND SODIUM |
PMEG.utg000114l.22 | VOLTAGE-GATED CATION CHANNEL CALCIUM AND SODIUM |
PMEG.utg000114l.23 | PROTEIN PHOSPHATASE 4 REGULATORY SUBUNIT 4 PPP4R4 |
PMEG.utg000114l.24 | PROTEIN PHOSPHATASE 4 REGULATORY SUBUNIT 4 PPP4R4 |
PMEG.utg000114l.25 | RIBOSOMAL PROTEIN S6 KINASE |
PMEG.utg000114l.26 | MITOCHONDRIAL IMPORT RECEPTOR SUBUNIT TOM20 |
PMEG.utg000114l.27 | SERINE/THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B |
PMEG.utg000114l.28 | CASEIN KINASE-RELATED |
PMEG.utg000114l.29 | UNCHARACTERIZED |
PMEG.utg000114l.3 | HOMEOBOX PROTEIN SIX |
PMEG.utg000114l.30 | HOOK PROTEINS |
PMEG.utg000114l.31 | FI17866P1 |
PMEG.utg000114l.32 | L-ASPARAGINASE |
PMEG.utg000114l.33 | MITOCHONDRIAL 39S RIBOSOMAL PROTEIN L49 |
PMEG.utg000114l.34 | SERINE-THREONINE PROTEIN KINASE |
PMEG.utg000114l.35 | UNCHARACTERIZED |
PMEG.utg000114l.36 | - |
PMEG.utg000114l.37 | N-ACETYLGALACTOSAMINYLTRANSFERASE |
PMEG.utg000114l.38 | ALPHA-TECTORIN-RELATED |
PMEG.utg000114l.39 | EXTRACELLULAR MATRIX GLYCOPROTEIN RELATED |
PMEG.utg000114l.4 | B-CELL LYMPHOMA/LEUKEMIA 11 |
PMEG.utg000114l.40 | EXTRACELLULAR MATRIX GLYCOPROTEIN RELATED |
PMEG.utg000114l.41 | H2.0-LIKE HOMEOBOX PROTEIN |
PMEG.utg000114l.42 | YLP MOTIF CONTAINING PROTEIN NUCLEAR PROTEIN ZAP |
PMEG.utg000114l.43 | HYPOXIA-INDUCIBLE FACTOR 1 ALPHA |
PMEG.utg000114l.44 | FINGER PUTATIVE TRANSCRIPTION FACTOR FAMILY-RELATED |
PMEG.utg000114l.45 | CALPONIN HOMOLOGY DOMAIN-CONTAINING PROTEIN DDB_G0272472-RELATED |
PMEG.utg000114l.46 | HOMEOBOX PROTEIN |
PMEG.utg000114l.47 | MITOCHONDRIAL RIBOSOMAL PROTEIN S5 |
PMEG.utg000114l.48 | BOMBESIN RECEPTOR-ACTIVATED PROTEIN C6ORF89 |
PMEG.utg000114l.49 | PRE-MRNA PROCESSING PROTEIN PRP39-RELATED |
PMEG.utg000114l.5 | SPLICING FACTOR SUPPRESSOR OF WHITE APRICOT |
PMEG.utg000114l.50 | TRANSMEMBRANE PROTEIN 179 |
PMEG.utg000114l.51 | |
PMEG.utg000114l.52 | |
PMEG.utg000114l.53 | RNA METHYLTRANSFERASE |
PMEG.utg000114l.54 | GLIAL FACTOR NATURATION FACTOR |
PMEG.utg000114l.55 |