The Atlantic deep-sea scallop Placopecten magellanicus is a species in the family Pectinidae. And they are a commercially important pectinid bivalve mollusk native to the northwest Atlantic Ocean. In addition, they are found on the continental shelf of the northwest Atlantic from the north shore of the Gulf of St. Lawrence south to Cape Hatteras, North Carolina.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Placopecten magellanicus | Mollusca | deep-sea scallop | Hydrothermal vent | 0-384 | Dalian in the Liaoning Province of China (38.43 N 120.91 E) | 6577 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 1.83Gb | Chromosome | 2023 | - | Dalian Key Laboratory of Genetic Resources for Marine Shellfish, Liaoning Ocean and Fisheries Science Research Institute | PRJNA923123 | 94.10% | 28,111 |
Title | Journal | Pubmed ID |
---|---|---|
Chromosome-level genome assembly of sea scallop Placopecten magellanicus provides insights into the genetic characteristics and adaptive evolution of large scallops | Genomics | 37977331 |
Gene ID | Description |
---|---|
PMEG.utg000111l.59 | JBTS17 |
PMEG.utg000111l.6 | DISCS LARGE |
PMEG.utg000111l.60 | |
PMEG.utg000111l.61 | POLY A POLYMERASE CID PAP -RELATED |
PMEG.utg000111l.62 | RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED |
PMEG.utg000111l.63 | |
PMEG.utg000111l.64 | UNCHARACTERIZED |
PMEG.utg000111l.65 | TRANSMEMBRANE PROTEIN 68 |
PMEG.utg000111l.66 | UNCHARACTERIZED |
PMEG.utg000111l.67 | EUKARYOTIC TRANSLATION INITIATION FACTOR 2D |
PMEG.utg000111l.68 | UNCHARACTERIZED |
PMEG.utg000111l.69 | AMILORIDE-SENSITIVE SODIUM CHANNEL-RELATED |
PMEG.utg000111l.7 | GROWTH ARREST AND DNA DAMAGE-INDUCIBLE PROTEINS-INTERACTING PROTEIN 1 GADD45GIP1 |
PMEG.utg000111l.70 | AMILORIDE-SENSITIVE SODIUM CHANNEL-RELATED |
PMEG.utg000111l.71 | IONOTROPIC GLUTAMATE RECEPTOR |
PMEG.utg000111l.72 | IONOTROPIC GLUTAMATE RECEPTOR |
PMEG.utg000111l.73 | PROTEIN FAM167A |
PMEG.utg000111l.74 | ANKYRIN REPEAT AND PROTEIN KINASE DOMAIN-CONTAINING PROTEIN |
PMEG.utg000111l.75 | AMINO ACID TRANSPORTER |
PMEG.utg000111l.76 | AMINO ACID TRANSPORTER |
PMEG.utg000111l.77 | AMINO ACID TRANSPORTER |
PMEG.utg000111l.78 | TRANSCRIPTION FACTOR S-II ZINC FINGER DOMAIN-CONTAINING PROTEIN |
PMEG.utg000111l.79 | CEREBRAL CAVERNOUS MALFORMATIONS PROTEIN 2 HOMOLOG |
PMEG.utg000111l.8 | SAM DOMAIN-CONTAINING PROTEIN-RELATED |
PMEG.utg000111l.80 | U2 SMALL NUCLEAR RIBONUCLEOPROTEIN A |
PMEG.utg000111l.81 | DELTA ADAPTIN-RELATED |
PMEG.utg000111l.82 | THIOESTERASE SUPERFAMILY MEMBER-RELATED |
PMEG.utg000111l.83 | |
PMEG.utg000111l.84 | CYTOKINE RECEPTOR |
PMEG.utg000111l.85 | INACTIVE RHOMBOID PROTEIN |
PMEG.utg000111l.86 | WASH COMPLEX SUBUNIT 5 |
PMEG.utg000111l.87 | ENOLASE SUPERFAMILY, MANDELATE RACEMASE |
PMEG.utg000111l.9 | |
PMEG.utg000112l.1 | ENHANCER OF MRNA-DECAPPING PROTEIN 4 |
PMEG.utg000112l.10 | SRC-ASSOCIATED ADAPTOR PROTEIN |
PMEG.utg000112l.11 | EUKARYOTIC TRANSLATION INITIATION FACTOR |
PMEG.utg000112l.12 | CHROMOBOX PROTEIN |
PMEG.utg000112l.13 | CYTOCHROME B-C1 COMPLEX SUBUNIT RIESKE, MITOCHONDRIAL |
PMEG.utg000112l.14 | BETA-CATENIN-LIKE PROTEIN 1 NUCLEAR ASSOCIATED PROTEIN |
PMEG.utg000112l.15 | ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 18 |
PMEG.utg000112l.16 | ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 18 |
PMEG.utg000112l.17 | PIEZO-TYPE MECHANOSENSITIVE ION CHANNEL HOMOLOG |
PMEG.utg000112l.18 | |
PMEG.utg000112l.19 | |
PMEG.utg000112l.2 | ANK_REP_REGION DOMAIN-CONTAINING PROTEIN |
PMEG.utg000112l.20 | NISCHARIN RELATED |
PMEG.utg000112l.21 | RADICAL S-ADENOSYL METHIONINE DOMAIN-CONTAINING PROTEIN 2 |
PMEG.utg000112l.3 | |
PMEG.utg000112l.4 | FAD SYNTHASE |
PMEG.utg000112l.5 | UNCHARACTERIZED |