About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides23057-
Paelopatides23058BLUE CHEESE
Paelopatides23059ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides23060ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides23061REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides23062-
Paelopatides23068REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides23069ENDONUCLEASE-RELATED
Paelopatides23070ENDONUCLEASE
Paelopatides23071BUCENTAUR RELATED
Paelopatides23072-
Paelopatides23073-
Paelopatides23075FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides23076ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides23077ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides23078ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides23079PROTEIN CBG26694
Paelopatides23080-
Paelopatides23081BUCENTAUR RELATED
Paelopatides23082ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
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