About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides22922-
Paelopatides22923-
Paelopatides22924VOLTAGE-GATED POTASSIUM CHANNEL
Paelopatides22925VOLTAGE-GATED POTASSIUM CHANNEL
Paelopatides22926ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
Paelopatides22927ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides22928ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides22929SPERM-SPECIFIC FAMILY, CLASS Q
Paelopatides22930BUCENTAUR RELATED
Paelopatides22931REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides22932-
Paelopatides22933SNRNA-ACTIVATING PROTEIN COMPLEX SUBUNIT 4
Paelopatides22934MYB PROTEIN-RELATED
Paelopatides22935PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Paelopatides22936-
Paelopatides22937DUF3504 DOMAIN-CONTAINING PROTEIN
Paelopatides22938-
Paelopatides22939PROTEIN CBG26694
Paelopatides22940GLUTAREDOXIN 2
Paelopatides22941-
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