About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides23150FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides23151-
Paelopatides23152WNT RELATED
Paelopatides23153FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides23154PROTEIN CBG26694
Paelopatides23155FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides23156-
Paelopatides23157SODIUM-COUPLED MONOCARBOXYLATE TRANSPORTER
Paelopatides23158-
Paelopatides23159NEUROTRANSMITTER GATED ION CHANNEL
Paelopatides23160-
Paelopatides23161OLIGORIBONUCLEASE, MITOCHONDRIAL
Paelopatides23162FINGER PUTATIVE TRANSCRIPTION FACTOR FAMILY-RELATED
Paelopatides23163TRANSCRIPTASE, PUTATIVE-RELATED-RELATED
Paelopatides23164PROTEIN CBG26694
Paelopatides23165PROTEIN CBG26694
Paelopatides23166PROTEIN CBG26694
Paelopatides23167PROTEIN CBG26694
Paelopatides23168-
Paelopatides23169ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
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