About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides33379BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE
Paelopatides33380RNA 3' TERMINAL PHOSPHATE CYCLASE
Paelopatides33381EG:EG0003.4 PROTEIN-RELATED
Paelopatides33382ENDONUCLEASE-RELATED
Paelopatides33385UNCHARACTERIZED
Paelopatides33386COILED-COIL-HELIX-COILED-COIL-HELIX DOMAIN-CONTAINING PROTEIN 7
Paelopatides33387COILED-COIL DOMAIN-CONTAINING PROTEIN 189
Paelopatides33389RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE
Paelopatides33390PROTEIN CBG26694
Paelopatides33391RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE
Paelopatides33392-
Paelopatides33393-
Paelopatides33394EXOCYST COMPLEX COMPONENT 4
Paelopatides33395UBIQUITIN-LIKE DOMAIN-CONTAINING CTD PHOSPHATASE 1
Paelopatides33396TRANSFORMER-2 SEX-DETERMINING PROTEIN-RELATED
Paelopatides33397-
Paelopatides33398ADP-RIBOSYLATION FACTOR-LIKE PROTEIN 13B
Paelopatides33399SRCR DOMAIN-CONTAINING PROTEIN
Paelopatides33400-
Paelopatides33402-
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