About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides41908TUBULIN
Paelopatides41909TUBULIN
Paelopatides41910CYTOCHROME P450 508A4-RELATED
Paelopatides41911DNA REPAIR ENDONUCLEASE XPF
Paelopatides41912SNF2/RAD54 HELICASE FAMILY
Paelopatides41913SNF2/RAD54 HELICASE FAMILY
Paelopatides41914PROTEIN CBG26694
Paelopatides41915-
Paelopatides41916TOLL-INTERACTING PROTEIN
Paelopatides41917-
Paelopatides41918-
Paelopatides41919REVERSE TRANSCRIPTASES
Paelopatides41920SPERM-SPECIFIC FAMILY, CLASS Q
Paelopatides41921CEREBELLIN-RELATED
Paelopatides41922-
Paelopatides41923ECTO-NOX DISULFIDE-THIOL EXCHANGER
Paelopatides41924PARANEOPLASTIC ANTIGEN
Paelopatides41925PROTEIN CBG26694
Paelopatides41926ECTO-NOX DISULFIDE-THIOL EXCHANGER
Paelopatides41927CYTIDYLYLTRANSFERASE
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