About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides41885OLIGORIBONUCLEASE, MITOCHONDRIAL
Paelopatides41886OPTICIN
Paelopatides41887-
Paelopatides41888ALPHA-2,8-SIALYLTRANSFERASE
Paelopatides41889REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides41890PULMONARY SURFACTANT-ASSOCIATED PROTEIN A
Paelopatides41893UNCHARACTERIZED
Paelopatides41894RIBOSOME RECYCLING FACTOR
Paelopatides41895L1 TRANSPOSABLE ELEMENT-RELATED
Paelopatides41897-
Paelopatides41898-
Paelopatides41899POLYRIBONUCLEOTIDE NUCLEOTIDYLTRANSFERASE
Paelopatides41900-
Paelopatides41901FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides41902REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides41903FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides41904-
Paelopatides41905FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides41906TRANSPOSON
Paelopatides41907-
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