About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

<< First 1994 1995 1996 1997 1998 1999 2000 2001 2002 2003 Forward> Last>>        2877 pages in total

Gene IDDescription
Paelopatides42797SI:CH211-108C17.2-RELATED-RELATED
Paelopatides42798AGAP005574-PA
Paelopatides42799NACHT DOMAIN-CONTAINING PROTEIN
Paelopatides42800PROTEIN CBG26694
Paelopatides42801PROTEIN CBG26694
Paelopatides42802ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides42803-
Paelopatides42804REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides42805TRANSPOSON
Paelopatides42806-
Paelopatides42807CRUMBS FAMILY MEMBER
Paelopatides42808ADAMTS A DISINTEGRIN AND METALLOPROTEASE WITH THROMBOSPONDIN MOTIFS PROTEASE
Paelopatides42809ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides42810-
Paelopatides42811-
Paelopatides42812SYNAPTIC ADHESION-LIKE MOLECULE SALM
Paelopatides42813RETROTRANSPOSON
Paelopatides42814PHD-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides42815-
Paelopatides42817LEUCINE-RICH MELANOCYTE DIFFERENTIATION-ASSOCIATED PROTEIN
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